CPIJ010064 (Culex quinquefasciatus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 CPIJ010064 T206134_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Six2
M00425_2.00 		Mus musculus
NNAYMYNN
NNRKRTNN		 PBM
Berger et al.(2008)
Six2_2307 		0.866 0.964
so
M02117_2.00 		Drosophila melanogaster
NDATMYNNN
NNNRKATHN		 PBM
Weirauch et al.(2014)
pTH5690 		0.866 0.964
so
M03800_2.00 		Drosophila melanogaster
NYGATAYB
VRTATCRN		 SELEX
Nitta et al.(2015)
so_1 		0.866 0.964
so
M03801_2.00 		Drosophila melanogaster
YKATAYNNNYGATAY
RTATCRNNNRTATMR		 SELEX
Nitta et al.(2015)
so_2 		0.866 0.964
so
M03802_2.00 		Drosophila melanogaster
YGATACGTATCR
YGATACGTATCR		 SELEX
Nitta et al.(2015)
so_3 		0.866 0.964
so
M03803_2.00 		Drosophila melanogaster
RTATCRYGATAC
GTATCRYGATAY		 SELEX
Nitta et al.(2015)
so_4 		0.866 0.964
SIX2
M05285_2.00 		Homo sapiens
NNYGATACSB
VSGTATCRNN		 SELEX
Yin et al.(2017)
SIX2_eDBD_HT-SELEX 		0.866 0.964
SIX2
M05287_2.00 		Homo sapiens
NSGTRWCRYN
NRYGWYACSN		 SELEX
Yin et al.(2017)
SIX2_FL_HT-SELEX 		0.866 0.964
so
M06497_2.00 		Drosophila melanogaster
TGATAC
GTATCA		 B1H
Mathelier et al.(2014)
MA0246.1 		0.866 0.964
so
M06268_2.00 		Drosophila melanogaster
NRTGATA
TATCAYN		 B1H
Zhu et al.(2011)
So_Cell_FBgn0003460 		0.866 0.964
so
M06269_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
So_SOLEXA_FBgn0003460 		0.866 0.964
SIX2
M08133_2.00 		Homo sapiens
NNNTGWAACCTGAKMH
DKMTCAGGTTWCANNN		 ChIP-seq
Mathelier et al.(2014)
MA1119.1 		0.866 0.964
SIX2
M09157_2.00 		Homo sapiens
DGWAAYHHGABMH
DKVTCDDRTTWCH		 Misc
Kulakovskiy et al.(2013)
SIX2_HUMAN.H11MO.0.A 		0.866 0.964
Six2
M09185_2.00 		Mus musculus
DGWAAYHYRABMYB
VRKVTYRDRTTWCH		 Misc
Kulakovskiy et al.(2013)
SIX2_MOUSE.H11MO.0.A 		0.866 0.964
SIX2
M05286_2.00 		Homo sapiens
NBRTATCRNN
NNYGATAYVN		 SELEX
Yin et al.(2017)
SIX2_eDBD_Methyl-HT-SELEX 		0.866 0.964
SIX2
M05288_2.00 		Homo sapiens
VBRTAWCRNN
NNYGWTAYVB		 SELEX
Yin et al.(2017)
SIX2_FL_Methyl-HT-SELEX 		0.866 0.964
Six1
M00512_2.00 		Mus musculus
NNDATMYNNN
NNNRKATHNN		 PBM
Berger et al.(2008)
Six1_0935 		0.864 0.945
SIX1
M05094_2.00 		Homo sapiens
NNYGATACVB
VBGTATCRNN		 SELEX
Yin et al.(2017)
SIX1_eDBD_HT-SELEX 		0.864 0.945
SIX1
M05096_2.00 		Homo sapiens
NNYGATAYVB
VBRTATCRNN		 SELEX
Yin et al.(2017)
SIX1_FL_HT-SELEX 		0.864 0.945
SIX1
M08130_2.00 		Homo sapiens
GWAACCTGANM
KNTCAGGTTWC		 ChIP-seq
Mathelier et al.(2014)
MA1118.1 		0.864 0.945
SIX1
M09142_2.00 		Homo sapiens
DGWAAYHTGABMYN
NRKVTCADRTTWCH		 Misc
Kulakovskiy et al.(2013)
SIX1_HUMAN.H11MO.0.A 		0.864 0.945
Six1
M09579_2.00 		Mus musculus
GWAAYHTGABMH
DKVTCADRTTWC		 Misc
Heinz et al.(2010)
Myoblast-Six1_GSE20150 		0.864 0.945
SIX1
M10684_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX1_Q3_01 		0.864 0.945
SIX1
M10685_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX1_Q3 		0.864 0.945
SIX1
M05095_2.00 		Homo sapiens
NNYGATABNB
VNVTATCRNN		 SELEX
Yin et al.(2017)
SIX1_eDBD_Methyl-HT-SELEX 		0.864 0.945
SIX1
M05097_2.00 		Homo sapiens
NNYGATAYSB
VSRTATCRNN		 SELEX
Yin et al.(2017)
SIX1_FL_Methyl-HT-SELEX 		0.864 0.945
Six4
M00461_2.00 		Mus musculus
NNKABMHNN
NNDKVTMNN		 PBM
Berger et al.(2008)
Six4_2860 		0.708 0.691
Six4
M00563_2.00 		Drosophila melanogaster
NNDANMHNN
NNDKNTHNN		 PBM
Busser et al.(2012a)
Six4 		0.708 0.691
SIX4
M04939_2.00 		Homo sapiens
NVYGATACVB
VBGTATCRBN		 SELEX
Yin et al.(2017)
SIX4_eDBD_HT-SELEX 		0.708 0.691
Six4
M06530_2.00 		Drosophila melanogaster
TGABAC
GTVTCA		 B1H
Mathelier et al.(2014)
MA0204.1 		0.708 0.691
Six4
M06334_2.00 		Drosophila melanogaster
WDDTGABAC
GTVTCAHHW		 B1H
Zhu et al.(2011)
Six4_Cell_FBgn0027364 		0.708 0.691
Six4
M06335_2.00 		Drosophila melanogaster
NTGAKACB
VGTMTCAN		 B1H
Zhu et al.(2011)
Six4_SOLEXA_2_FBgn0027364 		0.708 0.691
Six4
M06336_2.00 		Drosophila melanogaster
NNNTGABA
TVTCANNN		 B1H
Zhu et al.(2011)
Six4_SOLEXA_FBgn0027364 		0.708 0.691
Six4
M09198_2.00 		Mus musculus
DGDAABHNSASNNN
NNNSTSNDVTTHCH		 Misc
Kulakovskiy et al.(2013)
SIX4_MOUSE.H11MO.0.C 		0.708 0.691
SIX4
M10646_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX4_Q3 		0.708 0.691
SIX4
M04940_2.00 		Homo sapiens
NBGTAWCRHN
NDYGWTACVN		 SELEX
Yin et al.(2017)
SIX4_eDBD_Methyl-HT-SELEX 		0.708 0.691
SIX5
M08208_2.00 		Homo sapiens
GARWTGTAGT
ACTACAWYTC		 ChIP-seq
Contrino et al.(2012)
Mv121 		0.708 0.655
SIX5
M08209_2.00 		Homo sapiens
GGAGTTGT
ACAACTCC		 ChIP-seq
Contrino et al.(2012)
Mv123 		0.708 0.655
SIX5
M10738_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX5_01 		0.708 0.655
SIX5
M10739_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX5_02 		0.708 0.655
ceh-34
M00672_2.00 		Caenorhabditis elegans
NNNRDAWNNN
NNNWTHYNNN		 PBM
Narasimhan et al.(2015)
pTH9708 		0.664 0.636
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CPIJ010064-PA Homeodomain 57 111

Links

Other Homeodomain family TFs
Other Culex quinquefasciatus TFs

541 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R009606 Calypte anna Aan_R009606 I 0.000
Afo_R005157 Aptenodytes forsteri Afo_R005157 I 0.000
Afo_R005555 Aptenodytes forsteri Afo_R005555 I 0.000
Alligator_sinensis_CCG009102.1 Alligator sinensis Alligator_sinensis_CCG009102.1 I 0.000
Alligator_sinensis_CCG011017.1 Alligator sinensis Alligator_sinensis_CCG011017.1 I 0.000
Aqu1.218726 Amphimedon queenslandica Aqu1.218726 I 0.000
Brh_R005579 Buceros rhinoceros Brh_R005579 I 0.000
Brh_R011837 Buceros rhinoceros Brh_R011837 I 0.000
CapteG182542 Capitella teleta CapteG182542 I 0.000
CapteG228069 Capitella teleta CapteG228069 I 0.000
CGI_10018323 Crassostrea gigas CGI_10018323 I 0.000
CLEC011631 Cimex lectularius CLEC011631 N 0.000
Cmyd_10005434 Chelonia mydas Cmyd_10005434 I 0.000
Cmyd_10006677 Chelonia mydas Cmyd_10006677 I 0.000
DAPPUDRAFT_347250 Daphnia pulex DAPPUDRAFT_347250 N 0.000
ENSAMEG00000009592 Ailuropoda melanoleuca ENSAMEG00000009592 I 0.000
ENSAMEG00000011612 Ailuropoda melanoleuca ENSAMEG00000011612 I 0.000
ENSAMXG00000011148 Astyanax mexicanus ENSAMXG00000011148 N 0.000
ENSAMXG00000011237 Astyanax mexicanus ENSAMXG00000011237 I 0.000
ENSAMXG00000018013 Astyanax mexicanus ENSAMXG00000018013 I 0.000
ENSAPLG00000003195 Anas platyrhynchos ENSAPLG00000003195 I 0.000
ENSAPLG00000007112 Anas platyrhynchos ENSAPLG00000007112 I 0.000
ENSAPLG00000007121 Anas platyrhynchos ENSAPLG00000007121 I 0.000
ENSCAFG00000032212 Canis familiaris ENSCAFG00000032212 I 0.000
ENSCPOG00000000704 Cavia porcellus ENSCPOG00000000704 I 0.000
ENSCSAG00000001134 Chlorocebus sabaeus ENSCSAG00000001134 I 0.000
ENSCSAG00000013410 Chlorocebus sabaeus ENSCSAG00000013410 I 0.000
ENSCSAG00000016312 Chlorocebus sabaeus ENSCSAG00000016312 I 0.000
ENSDORG00000009001 Dipodomys ordii ENSDORG00000009001 I 0.000
ENSFALG00000000542 Ficedula albicollis ENSFALG00000000542 I 0.000
ENSFALG00000008605 Ficedula albicollis ENSFALG00000008605 I 0.000
ENSFALG00000011461 Ficedula albicollis ENSFALG00000011461 I 0.000
ENSGALG00000021593 Gallus gallus ENSGALG00000021593 I 0.000
ENSGMOG00000011084 Gadus morhua ENSGMOG00000011084 I 0.000
ENSGMOG00000013488 Gadus morhua ENSGMOG00000013488 I 0.000
ENSGMOG00000017811 Gadus morhua ENSGMOG00000017811 I 0.000
ENSLACG00000006098 Latimeria chalumnae ENSLACG00000006098 I 0.000
ENSLACG00000012215 Latimeria chalumnae ENSLACG00000012215 I 0.000
ENSLACG00000015540 Latimeria chalumnae ENSLACG00000015540 I 0.000
ENSLOCG00000001853 Lepisosteus oculatus ENSLOCG00000001853 I 0.000
ENSLOCG00000017268 Lepisosteus oculatus ENSLOCG00000017268 I 0.000
ENSMEUG00000007444 Macropus eugenii ENSMEUG00000007444 I 0.000
ENSMPUG00000001859 Mustela putorius furo ENSMPUG00000001859 I 0.000
ENSMPUG00000014412 Mustela putorius furo ENSMPUG00000014412 I 0.000
ENSMPUG00000014531 Mustela putorius furo ENSMPUG00000014531 I 0.000
ENSNLEG00000002239 Nomascus leucogenys ENSNLEG00000002239 I 0.000
ENSNLEG00000013972 Nomascus leucogenys ENSNLEG00000013972 I 0.000
ENSOANG00000022119 Ornithorhynchus anatinus ENSOANG00000022119 I 0.000
ENSOARG00000007915 Ovis aries ENSOARG00000007915 I 0.000
ENSOARG00000008063 Ovis aries ENSOARG00000008063 I 0.000
ENSOARG00000020088 Ovis aries ENSOARG00000020088 I 0.000
ENSONIG00000002623 Oreochromis niloticus ENSONIG00000002623 I 0.000
ENSONIG00000003087 Oreochromis niloticus ENSONIG00000003087 I 0.000
ENSONIG00000004726 Oreochromis niloticus ENSONIG00000004726 I 0.000
ENSP00000338272 Macaca fascicularis ENSP00000338272 I 0.000
ENSP00000357348 Macaca fascicularis ENSP00000357348 I 0.000
ENSP00000357348-D1 Bos grunniens ENSP00000357348-D1 I 0.000
ENSP00000361943 Macaca fascicularis ENSP00000361943 I 0.000
ENSP00000361943-D1 Bos grunniens ENSP00000361943-D1 I 0.000
ENSPANG00000006227 Papio anubis ENSPANG00000006227 I 0.000
ENSPANG00000018687 Papio anubis ENSPANG00000018687 I 0.000
ENSPFOG00000001913 Poecilia formosa ENSPFOG00000001913 I 0.000
ENSPFOG00000014160 Poecilia formosa ENSPFOG00000014160 I 0.000
ENSPFOG00000015536 Poecilia formosa ENSPFOG00000015536 I 0.000
ENSPPYG00000001505 Pongo abelii ENSPPYG00000001505 I 0.000
ENSPPYG00000016987 Pongo abelii ENSPPYG00000016987 I 0.000
ENSPPYG00000018693 Pongo abelii ENSPPYG00000018693 I 0.000
ENSPSIG00000003791 Pelodiscus sinensis ENSPSIG00000003791 I 0.000
ENSPSIG00000012495 Pelodiscus sinensis ENSPSIG00000012495 I 0.000
ENSSHAG00000016487 Sarcophilus harrisii ENSSHAG00000016487 I 0.000
ENSSHAG00000017958 Sarcophilus harrisii ENSSHAG00000017958 I 0.000
ENSSHAG00000018213 Sarcophilus harrisii ENSSHAG00000018213 I 0.000
ENSSSCG00000024651 Sus scrofa ENSSSCG00000024651 I 0.000
ENSSTOG00000022371 Ictidomys tridecemlineatus ENSSTOG00000022371 I 0.000
ENSSTOG00000023191 Ictidomys tridecemlineatus ENSSTOG00000023191 I 0.000
ENSXMAG00000003593 Xiphophorus maculatus ENSXMAG00000003593 I 0.000
ENSXMAG00000006950 Xiphophorus maculatus ENSXMAG00000006950 I 0.000
ENSXMAG00000014241 Xiphophorus maculatus ENSXMAG00000014241 I 0.000
Gfo_R007552 Geospiza fortis Gfo_R007552 I 0.000
Gfo_R016187 Geospiza fortis Gfo_R016187 I 0.000
HEY1 Bos taurus ENSBTAG00000015717 I 0.000
HEY1 Canis familiaris ENSCAFG00000008391 I 0.000
HEY1 Callithrix jacchus ENSCJAG00000000477 I 0.000
HEY1 Cavia porcellus ENSCPOG00000008527 I 0.000
hey1 Danio rerio ENSDARG00000070538 I 0.000
HEY1 Dasypus novemcinctus ENSDNOG00000031981 I 0.000
HEY1 Equus caballus ENSECAG00000017010 I 0.000
HEY1 Felis catus ENSFCAG00000025542 I 0.000
HEY1 Homo sapiens ENSG00000164683 D 0.000
hey1 Gasterosteus aculeatus ENSGACG00000003436 I 0.000
HEY1 Gasterosteus aculeatus ENSGACG00000008712 I 0.000
HEY1 Gorilla gorilla ENSGGOG00000009960 I 0.000
HEY1 Loxodonta africana ENSLAFG00000011488 I 0.000
HEY1 Meleagris gallopavo ENSMGAG00000011620 I 0.000
HEY1 Macaca mulatta ENSMMUG00000002740 I 0.000
HEY1 Monodelphis domestica ENSMODG00000006648 I 0.000
Hey1 Mus musculus ENSMUSG00000040289 I 0.000
HEY1 Otolemur garnettii ENSOGAG00000007210 I 0.000
HEY1 Oryzias latipes ENSORLG00000008268 I 0.000
hey1 Oryzias latipes ENSORLG00000012953 I 0.000
HEY1 Pan troglodytes ENSPTRG00000020364 I 0.000
Hey1 Rattus norvegicus ENSRNOG00000011593 I 0.000
HEY1 Sus scrofa ENSSSCG00000006159 I 0.000
hey1 Tetraodon nigroviridis ENSTNIG00000017785 I 0.000
HEY1 Tetraodon nigroviridis ENSTNIG00000018401 I 0.000
HEY1 Takifugu rubripes ENSTRUG00000013573 I 0.000
hey1 Takifugu rubripes ENSTRUG00000014561 I 0.000
hey1 Xenopus tropicalis XB-GENE-486694 I 0.000
hey1.S Xenopus laevis XB-GENE-865637 I 0.000
HEY2 Anolis carolinensis ENSACAG00000001813 I 0.000
HEY2 Bos taurus ENSBTAG00000000919 I 0.000
HEY2 Callithrix jacchus ENSCJAG00000003761 I 0.000
HEY2 Cavia porcellus ENSCPOG00000021417 I 0.000
hey2 Danio rerio ENSDARG00000013441 I 0.000
HEY2 Dasypus novemcinctus ENSDNOG00000044967 I 0.000
HEY2 Equus caballus ENSECAG00000014094 I 0.000
HEY2 Erinaceus europaeus ENSEEUG00000014040 I 0.000
HEY2 Echinops telfairi ENSETEG00000007340 I 0.000
HEY2 Felis catus ENSFCAG00000026914 I 0.000
HEY2 Homo sapiens ENSG00000135547 D 0.000
HEY2 Loxodonta africana ENSLAFG00000014208 I 0.000
HEY2 Meleagris gallopavo ENSMGAG00000013281 I 0.000
HEY2 Myotis lucifugus ENSMLUG00000002617 I 0.000
HEY2 Macaca mulatta ENSMMUG00000009491 I 0.000
HEY2 Monodelphis domestica ENSMODG00000017701 I 0.000
Hey2 Mus musculus ENSMUSG00000019789 D 0.000
HEY2 Otolemur garnettii ENSOGAG00000027812 I 0.000
HEY2 Pan troglodytes ENSPTRG00000018574 I 0.000
Hey2 Rattus norvegicus ENSRNOG00000013364 I 0.000
HEY2 Sorex araneus ENSSARG00000011755 I 0.000
HEY2 Sus scrofa ENSSSCG00000004223 I 0.000
HEY2 Tupaia belangeri ENSTBEG00000008836 I 0.000
HEY2 Taeniopygia guttata ENSTGUG00000011792 I 0.000
HEY2 Vicugna pacos ENSVPAG00000010498 I 0.000
hey2 Xenopus tropicalis XB-GENE-485923 I 0.000
HEYL Bos taurus ENSBTAG00000008688 I 0.000
heyl Danio rerio ENSDARG00000055798 I 0.000
HEYL Dasypus novemcinctus ENSDNOG00000010392 I 0.000
HEYL Equus caballus ENSECAG00000007220 I 0.000
HEYL Felis catus ENSFCAG00000010963 I 0.000
HEYL Homo sapiens ENSG00000163909 I 0.000
heyl Gasterosteus aculeatus ENSGACG00000007492 I 0.000
HEYL Gorilla gorilla ENSGGOG00000008268 I 0.000
HEYL Loxodonta africana ENSLAFG00000027563 I 0.000
HEYL Myotis lucifugus ENSMLUG00000029490 I 0.000
HEYL Macaca mulatta ENSMMUG00000018861 I 0.000
Heyl Mus musculus ENSMUSG00000032744 I 0.000
HEYL Ornithorhynchus anatinus ENSOANG00000010000 I 0.000
HEYL Oryctolagus cuniculus ENSOCUG00000000560 I 0.000
HEYL Otolemur garnettii ENSOGAG00000030877 I 0.000
heyl Oryzias latipes ENSORLG00000013651 I 0.000
HEYL Pan troglodytes ENSPTRG00000000574 I 0.000
Heyl Rattus norvegicus ENSRNOG00000015318 I 0.000
heyl Tetraodon nigroviridis ENSTNIG00000009228 I 0.000
heyl Takifugu rubripes ENSTRUG00000003399 I 0.000
HEYL Tursiops truncatus ENSTTRG00000014353 I 0.000
ISCW011251 Ixodes scapularis ISCW011251 I 0.000
L798_14068 Zootermopsis nevadensis L798_14068 I 0.000
LDEC001043 Leptinotarsa decemlineata LDEC001043 I 0.000
LotgiG171867 Lottia gigantea LotgiG171867 I 0.000
Myotis_brandtii_HEY1_10021379 Myotis brandtii Myotis_brandtii_HEY1_10021379 I 0.000
Myotis_brandtii_hey2_10035635 Myotis brandtii Myotis_brandtii_hey2_10035635 I 0.000
Ocbimv22039104m.g Octopus bimaculoides Ocbimv22039104m.g I 0.000
Ogr14041 Ophisaurus gracilis Ogr14041 I 0.000
Ogr15033 Ophisaurus gracilis Ogr15033 I 0.000
PABPC4 Canis familiaris ENSCAFG00000003081 I 0.000
PHUM454530 Pediculus humanus PHUM454530 I 0.000
Pvit_00065 Pogona vitticeps Pvit_00065 I 0.000
Pvit_01735 Pogona vitticeps Pvit_01735 I 0.000
Sakowv30023592m.g Saccoglossus kowalevskii Sakowv30023592m.g I 0.000
SPU_009465 Strongylocentrotus purpuratus SPU_009465 I 0.000
Tal_R012830 Tyto alba Tal_R012830 I 0.000
tetur01g03020 Tetranychus urticae tetur01g03020 I 0.000
YQE_09192 Dendroctonus ponderosae YQE_09192 I 0.000