ENSFALG00000005258 (Ficedula albicollis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSFALG00000005258 T209508_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.867 1.000
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.790 0.929
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.788 0.929
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.788 0.929
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.788 0.929
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.780 0.893
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.780 0.893
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.780 0.893
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.780 0.893
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.780 0.893
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.780 0.893
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.780 0.893
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.780 0.893
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.780 0.893
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSFALP00000005476 Homeodomain 144 202

Links

Other Homeodomain family TFs
Other Ficedula albicollis TFs

389 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
10921_YIL056W Saccharomyces mikatae 10921_YIL056W I 0.000
11035_YIL056W Saccharomyces paradoxus 11035_YIL056W I 0.000
11559_YIL056W Saccharomyces bayanus 11559_YIL056W I 0.000
6292_YER064C Saccharomyces paradoxus 6292_YER064C I 0.000
6651_YER064C Saccharomyces mikatae 6651_YER064C I 0.000
7027_YER064C Saccharomyces bayanus 7027_YER064C I 0.000
AACERI_AaceriADL067C Saccharomycetaceae sp ashbya aceri AACERI_AaceriADL067C I 0.000
AGOS_ADL067C Ashbya gossypii AGOS_ADL067C I 0.000
CAGL0J03014g Candida glabrata CAGL0J03014g I 0.000
Ecym_4329 Eremothecium cymbalariae Ecym_4329 I 0.000
KAFR_0I01770 Kazachstania africana KAFR_0I01770 I 0.000
KAFR_0L00930 Kazachstania africana KAFR_0L00930 I 0.000
KLLA0_C08151g Kluyveromyces lactis KLLA0_C08151g I 0.000
KLTH0A04444g Kluyveromyces thermotolerans KLTH0A04444g I 0.000
KLTH0A04444g Lachancea thermotolerans KLTH0A04444g I 0.000
KNAG_0D01580 Kazachstania naganishii KNAG_0D01580 I 0.000
KNAG_0L01530 Kazachstania naganishii KNAG_0L01530 I 0.000
Kpol_1066p52 Vanderwaltozyma polyspora Kpol_1066p52 I 0.000
Kwal_5842 Kluyveromyces waltii Kwal_5842 I 0.000
LALA0_S01e02388g Lachancea lanzarotensis LALA0_S01e02388g I 0.000
NCAS_0A13540 Naumovozyma castellii NCAS_0A13540 I 0.000
NCAS_0E03320 Naumovozyma castellii NCAS_0E03320 I 0.000
NDAI_0A02490 Naumovozyma dairenensis NDAI_0A02490 I 0.000
NDAI_0E04810 Naumovozyma dairenensis NDAI_0E04810 I 0.000
SAKL0F08734g Lachancea kluyveri SAKL0F08734g I 0.000
Scas_Contig701.7 Saccharomyces castellii Scas_Contig701.7 I 0.000
Scas_Contig704.29 Saccharomyces castellii Scas_Contig704.29 I 0.000
SKUD_176205 Saccharomyces kudriavzevii SKUD_176205 I 0.000
SU7_1620 Saccharomyces arboricola SU7_1620 I 0.000
TBLA_0C04650 Tetrapisispora blattae TBLA_0C04650 I 0.000
TDEL_0H01980 Torulaspora delbrueckii TDEL_0H01980 I 0.000
TPHA_0J00900 Tetrapisispora phaffii TPHA_0J00900 I 0.000
VHR2 Saccharomyces cerevisiae YER064C D 0.000
ZBAI_00133 Zygosaccharomyces bailii ZBAI_00133 I 0.000
ZBAI_05302 Zygosaccharomyces bailii ZBAI_05302 I 0.000
ZYRO0C08250g Zygosaccharomyces rouxii ZYRO0C08250g I 0.000