ENSONIG00000007108 (Oreochromis niloticus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSONIG00000007108 T213537_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.867 1.000
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.790 0.929
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.788 0.929
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.788 0.929
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.788 0.929
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.780 0.893
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.780 0.893
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.780 0.893
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.780 0.893
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.780 0.893
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.780 0.893
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.780 0.893
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.780 0.893
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.780 0.893
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSONIP00000008966 Homeodomain 143 201

Links

Other Homeodomain family TFs
Other Oreochromis niloticus TFs

389 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA017601 Oryza indica BGIOSGA017601 I 0.000
Bo8g078940 Brassica oleracea Bo8g078940 I 0.000
BRADI2G17280 Brachypodium distachyon BRADI2G17280 N 0.000
cassava16944.m1 Manihot esculenta cassava16944.m1 I 0.000
Ciclev10010621m.g Citrus clementina Ciclev10010621m.g I 0.000
Cla008857 Citrullus lanatus Cla008857 I 0.000
Cla023006 Citrullus lanatus Cla023006 N 0.000
F775_07686 Aegilops tauschii F775_07686 I 0.000
gene02652-v1.0-hybrid Fragaria vesca gene02652-v1.0-hybrid I 0.000
GLYMA14G10483 Glycine max GLYMA14G10483 I 0.000
GLYMA17G35020 Glycine max GLYMA17G35020 I 0.000
Gorai.001G024300 Gossypium raimondii Gorai.001G024300 I 0.000
Gorai.004G231100 Gossypium raimondii Gorai.004G231100 I 0.000
GSMUA_Achr5G21840_001 Musa acuminata GSMUA_Achr5G21840_001 I 0.000
Lus10001316.g Linum usitatissimum Lus10001316.g I 0.000
Lus10006978.g Linum usitatissimum Lus10006978.g I 0.000
MLOC_44167 Hordeum vulgare MLOC_44167 I 0.000
MTR_1g017000 Medicago truncatula MTR_1g017000 I 0.000
MTR_4g128670 Medicago truncatula MTR_4g128670 I 0.000
orange1.1g045583m.g Citrus sinensis orange1.1g045583m.g I 0.000
ORGLA05G0216200 Oryza glaberrima ORGLA05G0216200 I 0.000
ORUFI05G26880 Oryza rufipogon ORUFI05G26880 I 0.000
OS05G0553400 Oryza sativa OS05G0553400 I 0.000
Pavir.J11789 Panicum virgatum Pavir.J11789 I 0.000
Pavir.J15551 Panicum virgatum Pavir.J15551 I 0.000
PGSC0003DMG400000349 Solanum tuberosum PGSC0003DMG400000349 I 0.000
PK14382.1 Cannabis sativa PK14382.1 I 0.000
POPTR_0006s25060 Populus trichocarpa POPTR_0006s25060 I 0.000
PRUPE_ppa019554mg Prunus persica PRUPE_ppa019554mg I 0.000
SapurV1A.0890s0050 Salix purpurea SapurV1A.0890s0050 I 0.000
SapurV1A.3377s0010 Salix purpurea SapurV1A.3377s0010 I 0.000
Sb09g027800 Sorghum bicolor Sb09g027800 I 0.000
Si022874m.g Setaria italica Si022874m.g I 0.000
TCM_037245 Theobroma cacao TCM_037245 I 0.000
Traes_7AL_5B57EF9FC Triticum aestivum Traes_7AL_5B57EF9FC I 0.000
Traes_7DL_20EC9096A Triticum aestivum Traes_7DL_20EC9096A I 0.000
TRIUR3_21241 Triticum urartu TRIUR3_21241 I 0.000
VIT_04s0008g00620 Vitis vinifera VIT_04s0008g00620 I 0.000