ENSPMAG00000002391 (Petromyzon marinus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSPMAG00000002391 T214589_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.856 0.965
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.856 0.965
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.856 0.965
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.856 0.965
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.856 0.965
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.856 0.965
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.813 0.912
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.813 0.912
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.813 0.912
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.804 0.860
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.804 0.860
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.804 0.860
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.778 0.860
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.778 0.842
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPMAP00000002608 Homeodomain 38 97

Links

Other Homeodomain family TFs
Other Petromyzon marinus TFs

379 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA001951 Oryza indica BGIOSGA001951 N 0.000
BRADI2G09530 Brachypodium distachyon BRADI2G09530 I 0.000
F775_26445 Aegilops tauschii F775_26445 N 0.000
GRMZM2G064541 Zea mays GRMZM2G064541 N 0.000
GRMZM2G167492 Zea mays GRMZM2G167492 N 0.000
GSMUA_Achr5G23620_001 Musa acuminata GSMUA_Achr5G23620_001 N 0.000
GSMUA_Achr6G03200_001 Musa acuminata GSMUA_Achr6G03200_001 N 0.000
LPERR01G09570 Leersia perrieri LPERR01G09570 N 0.000
MLOC_6066 Hordeum vulgare MLOC_6066 N 0.000
NAC74 Oryza sativa OS01G0261200 N 0.000
OBART01G10140 Oryza barthii OBART01G10140 N 0.000
OGLUM01G11550 Oryza glumaepatula OGLUM01G11550 N 0.000
OLONG_004099 Oryza longistaminata OLONG_004099 N 0.000
OMERI01G10150 Oryza meridionalis OMERI01G10150 N 0.000
ONIVA01G12610 Oryza nivara ONIVA01G12610 N 0.000
OPUNC01G10020 Oryza punctata OPUNC01G10020 N 0.000
ORGLA01G0091700 Oryza glaberrima ORGLA01G0091700 N 0.000
ORUFI01G11090 Oryza rufipogon ORUFI01G11090 N 0.000
Pavir.Ea01166 Panicum virgatum Pavir.Ea01166 N 0.000
Pavir.Eb01057 Panicum virgatum Pavir.Eb01057 N 0.000
PDK_20s1330231g003 Phoenix dactylifera PDK_20s1330231g003 N 0.000
Sb03g010130 Sorghum bicolor Sb03g010130 N 0.000
Si001021m.g Setaria italica Si001021m.g N 0.000
Traes_3AS_DE5832BF8 Triticum aestivum Traes_3AS_DE5832BF8 N 0.000
Traes_3DS_7C9147219 Triticum aestivum Traes_3DS_7C9147219 N 0.000
TRIUR3_25713 Triticum urartu TRIUR3_25713 N 0.000