ENSPMAG00000010130 (Petromyzon marinus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSPMAG00000010130 T214623_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SIX6
M00325_2.00 		Homo sapiens
NNNDATMB
VKATHNNN		 PBM
Barrera et al.(2016)
SIX6_H141N 		0.696 1.000
SIX6
M00326_2.00 		Homo sapiens
NNDATMB
VKATHNN		 PBM
Barrera et al.(2016)
SIX6_REF 		0.694 0.981
Six6
M00169_2.00 		Mus musculus
NNAYMNN
NNKRTNN		 PBM
Badis et al.(2009)
Six6_2267 		0.694 0.981
Six6
M00412_2.00 		Mus musculus
NNNTGATAYCN
NGRTATCANNN		 PBM
Berger et al.(2008)
Six6_2267 		0.694 0.981
Six3
M00483_2.00 		Mus musculus
NNNAYMN
NKRTNNN		 PBM
Berger et al.(2008)
Six3_1732 		0.694 0.981
SIX3
M05159_2.00 		Homo sapiens
NNYGATABBN
NVVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX 		0.694 0.981
SIX6
M05357_2.00 		Homo sapiens
NNYGATASVB
VBSTATCRNN		 SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX 		0.694 0.981
SIX3
M10698_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX3_Q6 		0.694 0.981
SIX3
M05160_2.00 		Homo sapiens
NNYGATABVB
VBVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX 		0.694 0.981
SIX6
M05358_2.00 		Homo sapiens
VBVYAYCRNN
NNYGRTRBVB		 SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX 		0.694 0.981
six3
M02102_2.00 		Oryzias latipes
NNDAYMBNNN
NNNVKRTHNN		 PBM
Weirauch et al.(2014)
pTH5928 		0.694 0.942
Optix
M02124_2.00 		Drosophila melanogaster
NNNNNDATMN
NKATHNNNNN		 PBM
Weirauch et al.(2014)
pTH5437 		0.694 0.923
Optix
M03850_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
Optix_1 		0.694 0.923
Optix
M06526_2.00 		Drosophila melanogaster
TGATA
TATCA		 B1H
Mathelier et al.(2014)
MA0199.1 		0.694 0.923
Optix
M06327_2.00 		Drosophila melanogaster
HHVTGATA
TATCABDD		 B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360 		0.694 0.923
Optix
M06328_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360 		0.694 0.923
SIX6
M00327_2.00 		Homo sapiens
NHDAYMBNN
NNVKRTHDN		 PBM
Barrera et al.(2016)
SIX6_T165A 		0.688 0.962
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPMAP00000011111 Homeodomain 12 63

Links

Other Homeodomain family TFs
Other Petromyzon marinus TFs

288 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACHR008952 Anopheles christyi ACHR008952 I 0.000
AEPI008594 Anopheles epiroticus AEPI008594 I 0.000
Alligator_sinensis_CCG011289.1 Alligator sinensis Alligator_sinensis_CCG011289.1 I 0.000
CPIJ013490 Culex quinquefasciatus CPIJ013490 I 0.000
CpipJ_CPIJ013490 Culex pipiens CpipJ_CPIJ013490 I 0.000
D917_06432 Trichinella nativa D917_06432 I 0.000
ECANG7_01760 Echinococcus canadensis ECANG7_01760 I 0.000
ENSAMXG00000010081 Astyanax mexicanus ENSAMXG00000010081 I 0.000
ENSCING00000019408 Ciona intestinalis ENSCING00000019408 I 0.000
ENSCSAG00000004676 Chlorocebus sabaeus ENSCSAG00000004676 I 0.000
ENSCSAVG00000007634 Ciona savignyi ENSCSAVG00000007634 I 0.000
ENSGALG00000000953 Gallus gallus ENSGALG00000000953 I 0.000
ENSGMOG00000015271 Gadus morhua ENSGMOG00000015271 I 0.000
ENSMPUG00000013114 Mustela putorius furo ENSMPUG00000013114 I 0.000
ENSOARG00000012126 Ovis aries ENSOARG00000012126 I 0.000
ENSPFOG00000003170 Poecilia formosa ENSPFOG00000003170 I 0.000
ENSPPYG00000003475 Pongo abelii ENSPPYG00000003475 I 0.000
ENSPSIG00000006176 Pelodiscus sinensis ENSPSIG00000006176 I 0.000
ENSXMAG00000003088 Xiphophorus maculatus ENSXMAG00000003088 N 0.000
e_gw.291.69.1 Branchiostoma floridae e_gw.291.69.1 I 0.000
MDOA005382 Musca domestica MDOA005382 I 0.000
Myotis_brandtii_TEAD3_10017764 Myotis brandtii Myotis_brandtii_TEAD3_10017764 I 0.000
NBR_0001654801 Nippostrongylus brasiliensis NBR_0001654801 I 0.000
NBR_0002152001 Nippostrongylus brasiliensis NBR_0002152001 I 0.000
PPAI001408 Phlebotomus papatasi PPAI001408 I 0.000
sd Drosophila melanogaster FBgn0003345 D 0.000
Tead1 Rattus norvegicus ENSRNOG00000015488 I 0.000
Tead1 Mus musculus ENSMUSG00000055320 D 0.000
TEAD1 Oryctolagus cuniculus ENSOCUG00000007955 I 0.000
TEAD1 Anolis carolinensis ENSACAG00000004642 I 0.000
TEAD1 Monodelphis domestica ENSMODG00000008613 I 0.000
TEAD1 Myotis lucifugus ENSMLUG00000009137 I 0.000
TEAD1 Canis familiaris ENSCAFG00000007976 I 0.000
TEAD1 Homo sapiens ENSG00000187079 D 0.000
tead1a Takifugu rubripes ENSTRUG00000005940 I 0.000
tead1a Danio rerio ENSDARG00000028159 I 0.000
tead1b Takifugu rubripes ENSTRUG00000017473 N 0.000
tead1b Danio rerio ENSDARG00000059483 I 0.000
TEAD3 Loxodonta africana ENSLAFG00000014818 I 0.000
TEAD3 Canis familiaris ENSCAFG00000001326 I 0.000
TEAD3 Equus caballus ENSECAG00000015056 I 0.000
TEAD3 Homo sapiens ENSG00000007866 D 0.000
TEAD3 Otolemur garnettii ENSOGAG00000002943 I 0.000
TEAD3 Microcebus murinus ENSMICG00000000029 I 0.000
TEAD3 Tursiops truncatus ENSTTRG00000009434 I 0.000
TEAD4 Homo sapiens ENSG00000197905 D 0.000
TEAD4 Meleagris gallopavo ENSMGAG00000013910 I 0.000
Tead4 Mus musculus ENSMUSG00000030353 D 0.000
TsM_000210300 Taenia solium TsM_000210300 I 0.000