IRX4 (Pteropus vampyrus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSPVAG00000004239 T215207_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.867 1.000
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.790 0.929
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.788 0.929
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.788 0.929
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.788 0.929
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.780 0.893
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.780 0.893
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.780 0.893
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.780 0.893
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.780 0.893
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.780 0.893
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.780 0.893
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.780 0.893
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.780 0.893
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000004012 Homeodomain 132 190

Links

Other Homeodomain family TFs
Other Pteropus vampyrus TFs

389 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCSAG00000008044 Chlorocebus sabaeus ENSCSAG00000008044 I 0.000
ENSEEUG00000006981 Erinaceus europaeus ENSEEUG00000006981 I 0.000
ENSMPUG00000001273 Mustela putorius furo ENSMPUG00000001273 I 0.000
ENSNLEG00000004577 Nomascus leucogenys ENSNLEG00000004577 I 0.000
ENSP00000289788 Macaca fascicularis ENSP00000289788 I 0.000
ENSPANG00000012448 Papio anubis ENSPANG00000012448 I 0.000
ENSSTOG00000004477 Ictidomys tridecemlineatus ENSSTOG00000004477 I 0.000
ENSTSYG00000000711 Tarsius syrichta ENSTSYG00000000711 I 0.000
ZSCAN23 Otolemur garnettii ENSOGAG00000006605 I 0.000
ZSCAN23 Bos taurus ENSBTAG00000037965 I 0.000
ZSCAN23 Vicugna pacos ENSVPAG00000000043 I 0.000
ZSCAN23 Tursiops truncatus ENSTTRG00000015648 I 0.000
ZSCAN23 Sorex araneus ENSSARG00000008482 I 0.000
ZSCAN23 Pan troglodytes ENSPTRG00000017876 I 0.000
ZSCAN23 Procavia capensis ENSPCAG00000015061 I 0.000
ZSCAN23 Equus caballus ENSECAG00000016879 I 0.000
ZSCAN23 Oryctolagus cuniculus ENSOCUG00000029301 I 0.000
ZSCAN23 Canis familiaris ENSCAFG00000024985 I 0.000
ZSCAN23 Choloepus hoffmanni ENSCHOG00000004064 I 0.000
ZSCAN23 Macaca mulatta ENSMMUG00000012396 I 0.000
ZSCAN23 Microcebus murinus ENSMICG00000010510 I 0.000
ZSCAN23 Gorilla gorilla ENSGGOG00000024543 I 0.000
ZSCAN23 Homo sapiens ENSG00000187987 D 0.000
ZSCAN23 Callithrix jacchus ENSCJAG00000018616 I 0.000
ZSCAN9 Monodelphis domestica ENSMODG00000008321 I 0.000