ENSTNIG00000000637 (Tetraodon nigroviridis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSTNIG00000000637 T216367_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.714 0.887
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.695 0.925
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.695 0.925
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.695 0.925
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.694 0.925
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.686 0.868
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.686 0.868
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.686 0.868
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.683 0.887
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.683 0.887
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.683 0.887
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.683 0.887
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.683 0.887
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.683 0.887
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000003114 Homeodomain 60 115

Links

Other Homeodomain family TFs
Other Tetraodon nigroviridis TFs

413 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000010206 Ailuropoda melanoleuca ENSAMEG00000010206 N 0.000
ENSAPLG00000013214 Anas platyrhynchos ENSAPLG00000013214 N 0.000
ENSFALG00000013343 Ficedula albicollis ENSFALG00000013343 N 0.000
ENSGALG00000012657 Gallus gallus ENSGALG00000012657 N 0.000
ENSGMOG00000006649 Gadus morhua ENSGMOG00000006649 N 0.000
ENSLOCG00000007831 Lepisosteus oculatus ENSLOCG00000007831 N 0.000
ENSMPUG00000016646 Mustela putorius furo ENSMPUG00000016646 N 0.000
ENSONIG00000007305 Oreochromis niloticus ENSONIG00000007305 N 0.000
ENSPANG00000006485 Papio anubis ENSPANG00000006485 N 0.000
ENSPFOG00000019127 Poecilia formosa ENSPFOG00000019127 N 0.000
ENSPPYG00000009253 Pongo abelii ENSPPYG00000009253 N 0.000
ENSPSIG00000008556 Pelodiscus sinensis ENSPSIG00000008556 N 0.000
ENSSHAG00000015872 Sarcophilus harrisii ENSSHAG00000015872 N 0.000
ENSSTOG00000004145 Ictidomys tridecemlineatus ENSSTOG00000004145 N 0.000
ENSXMAG00000009081 Xiphophorus maculatus ENSXMAG00000009081 N 0.000
Pvit_05136 Pogona vitticeps Pvit_05136 N 0.000
SALL1 Ornithorhynchus anatinus ENSOANG00000013399 N 0.000
sall1a Takifugu rubripes ENSTRUG00000008950 N 0.000
SALL3 Oryctolagus cuniculus ENSOCUG00000029398 N 0.000
SALL3 Tursiops truncatus ENSTTRG00000004958 N 0.000
SALL3 Pan troglodytes ENSPTRG00000010126 N 0.000
Sall3 Mus musculus ENSMUSG00000024565 N 0.000
SALL3 Anolis carolinensis ENSACAG00000000478 N 0.000
SALL3 Monodelphis domestica ENSMODG00000012231 N 0.000
SALL3 Macaca mulatta ENSMMUG00000000286 N 0.000
SALL3 Meleagris gallopavo ENSMGAG00000002297 N 0.000
SALL3 Canis familiaris ENSCAFG00000000013 N 0.000
SALL3 Callithrix jacchus ENSCJAG00000007332 N 0.000
SALL3 Gorilla gorilla ENSGGOG00000008127 N 0.000
SALL3 Cavia porcellus ENSCPOG00000008546 N 0.000
SALL3 Homo sapiens ENSG00000256463 N 0.000
SALL3 Equus caballus ENSECAG00000015414 N 0.000
sall3a Danio rerio ENSDARG00000079613 N 0.000
sall3a Oryzias latipes ENSORLG00000020718 N 0.000
sall3b Takifugu rubripes ENSTRUG00000003369 N 0.000
sall3b Danio rerio ENSDARG00000057586 N 0.000