GSMUA_Achr11G03290_001 (Musa acuminata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GSMUA_Achr11G03290_001 T219090_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANL2
M02046_2.00 		Arabidopsis thaliana
NCATTWATKNN
NNMATWAATGN		 PBM
Weirauch et al.(2014)
pTH8244 		0.783 0.860
ANL2
M06919_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_col_a 		0.783 0.860
ANL2
M06920_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_colamp_a 		0.783 0.860
HDG1
M06917_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_col100_a 		0.776 0.754
HDG1
M06918_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_colamp_a 		0.776 0.754
PK24181.1
M01252_2.00 		Cannabis sativa
NNNNNNNHDH
DHDNNNNNNN		 PBM
Lambert et al.(2019)
pTH11300 		0.765 0.719
ATML1
M02048_2.00 		Arabidopsis thaliana
NNHNRHYRNN
NNYRDYNDNN		 PBM
Weirauch et al.(2014)
pTH8203 		0.764 0.772
PDF2
M06921_2.00 		Arabidopsis thaliana
WNVGAATATTCYHTN
NADRGAATATTCBNW		 Dap-seq
OMalley et al.(2016)
PDF2_col 		0.764 0.772
ATML1
M10626_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ML1_01 		0.764 0.772
PDF2
M10625_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PDF2_01 		0.764 0.772
HDG11
M02039_2.00 		Arabidopsis thaliana
DCATTWAWKD
HMWTWAATGH		 PBM
Weirauch et al.(2014)
pTH7664 		0.749 0.719
HDG11
M06904_2.00 		Arabidopsis thaliana
DCATTWAWTRH
DYAWTWAATGH		 Dap-seq
OMalley et al.(2016)
EDT1_col 		0.749 0.719
HDG9
M10628_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG9_01 		0.727 0.596
HDG7
M06931_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG7_col_a 		0.723 0.684
HDG7
M10629_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG7_01 		0.723 0.684
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr11P03290_001 Homeodomain 114 170

Links

Other Homeodomain family TFs
Other Musa acuminata TFs

605 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC149818.2_FG009 Zea mays AC149818.2_FG009 I
Aquca_034_00400 Aquilegia coerulea Aquca_034_00400 I
BGIOSGA005344 Oryza indica BGIOSGA005344 I
BGIOSGA011445 Oryza indica BGIOSGA011445 I
BGIOSGA011866 Oryza indica BGIOSGA011866 I
BGIOSGA026473 Oryza indica BGIOSGA026473 I
Bo4g108600 Brassica oleracea Bo4g108600 I
Bo8g092560 Brassica oleracea Bo8g092560 I
Bostr.20903s0070 Boechera stricta Bostr.20903s0070 I
Bra007385 Brassica rapa Bra007385 N
Bra014581 Brassica rapa Bra014581 I
Bra016876 Brassica rapa Bra016876 N
BRADI1G75110 Brachypodium distachyon BRADI1G75110 I
BRADI1G75120 Brachypodium distachyon BRADI1G75120 N
BRADI3G12550 Brachypodium distachyon BRADI3G12550 I
BRADI3G55680 Brachypodium distachyon BRADI3G55680 I
Cagra.0686s0036 Capsella grandiflora Cagra.0686s0036 I
Carubv10019250m.g Capsella rubella Carubv10019250m.g I
cassava40664.m1 Manihot esculenta cassava40664.m1 I
cassava41632.m1 Manihot esculenta cassava41632.m1 I
Ca_12214 Cicer arietinum Ca_12214 I
Cla015094 Citrullus lanatus Cla015094 I
evm.TU.supercontig_50.42 Carica papaya evm.TU.supercontig_50.42 I
F775_02052 Aegilops tauschii F775_02052 I
F775_22967 Aegilops tauschii F775_22967 I
gene08253-v1.0-hybrid Fragaria vesca gene08253-v1.0-hybrid I
GLYMA10G04050 Glycine max GLYMA10G04050 I
GLYMA13G18210 Glycine max GLYMA13G18210 I
Gorai.004G073200 Gossypium raimondii Gorai.004G073200 I
Gorai.004G073300 Gossypium raimondii Gorai.004G073300 I
GRMZM2G075499 Zea mays GRMZM2G075499 I
GRMZM2G092483 Zea mays GRMZM2G092483 I
GRMZM2G092542 Zea mays GRMZM2G092542 I
GSMUA_Achr10G06700_001 Musa acuminata GSMUA_Achr10G06700_001 I
GSMUA_Achr11G02110_001 Musa acuminata GSMUA_Achr11G02110_001 I
GSMUA_Achr1G01350_001 Musa acuminata GSMUA_Achr1G01350_001 I
GSMUA_Achr1G01360_001 Musa acuminata GSMUA_Achr1G01360_001 I
GSMUA_Achr1G06580_001 Musa acuminata GSMUA_Achr1G06580_001 I
GSMUA_Achr4G25190_001 Musa acuminata GSMUA_Achr4G25190_001 I
GSMUA_Achr8G14330_001 Musa acuminata GSMUA_Achr8G14330_001 I
GSMUA_AchrUn_randomG07730_001 Musa acuminata GSMUA_AchrUn_randomG07730_001 I
GSMUA_AchrUn_randomG23710_001 Musa acuminata GSMUA_AchrUn_randomG23710_001 I
LBD16 Vitis vinifera VIT_07s0005g03030 I
LBD29 Arabidopsis thaliana AT3G58190 I
LBD29 Arabidopsis lyrata fgenesh2_kg.5__2263__AT3G58190.1 I
LjT35F15.90.nd Lotus japonicus LjT35F15.90.nd I
LPERR02G31040 Leersia perrieri LPERR02G31040 I
LPERR03G03460 Leersia perrieri LPERR03G03460 I
LPERR03G03470 Leersia perrieri LPERR03G03470 I
Lus10000613.g Linum usitatissimum Lus10000613.g I
mgf020773m Mimulus guttatus mgf020773m I
MLOC_10783 Hordeum vulgare MLOC_10783 N
MLOC_10784 Hordeum vulgare MLOC_10784 I
MLOC_52276 Hordeum vulgare MLOC_52276 I
MLOC_61947 Hordeum vulgare MLOC_61947 I
MTR_7g096610 Medicago truncatula MTR_7g096610 I
OB02G44330 Oryza brachyantha OB02G44330 I
OB03G13880 Oryza brachyantha OB03G13880 I
OB03G13890 Oryza brachyantha OB03G13890 I
OB08G30680 Oryza brachyantha OB08G30680 I
OBART03G03820 Oryza barthii OBART03G03820 I
OBART03G03830 Oryza barthii OBART03G03830 I
OBART08G23860 Oryza barthii OBART08G23860 I
OGLUM02G38740 Oryza glumaepatula OGLUM02G38740 I
OGLUM03G03700 Oryza glumaepatula OGLUM03G03700 I
OGLUM08G25340 Oryza glumaepatula OGLUM08G25340 I
OLONG_010223 Oryza longistaminata OLONG_010223 I
OLONG_020840 Oryza longistaminata OLONG_020840 N
OMERI02G35350 Oryza meridionalis OMERI02G35350 I
OMERI07G01660 Oryza meridionalis OMERI07G01660 I
OMERI07G01670 Oryza meridionalis OMERI07G01670 N
OMERI08G18670 Oryza meridionalis OMERI08G18670 I
ONIVA02G40360 Oryza nivara ONIVA02G40360 I
ONIVA03G03570 Oryza nivara ONIVA03G03570 I
ONIVA03G03580 Oryza nivara ONIVA03G03580 I
ONIVA09G01330 Oryza nivara ONIVA09G01330 I
OPUNC02G34750 Oryza punctata OPUNC02G34750 I
OPUNC03G03510 Oryza punctata OPUNC03G03510 I
OPUNC03G03520 Oryza punctata OPUNC03G03520 I
OPUNC08G21770 Oryza punctata OPUNC08G21770 I
ORGLA02G0327800 Oryza glaberrima ORGLA02G0327800 I
ORGLA03G0035800 Oryza glaberrima ORGLA03G0035800 I
ORGLA03G0035900 Oryza glaberrima ORGLA03G0035900 I
ORGLA08G0192400 Oryza glaberrima ORGLA08G0192400 I
ORUFI02G39110 Oryza rufipogon ORUFI02G39110 I
ORUFI03G03540 Oryza rufipogon ORUFI03G03540 I
ORUFI03G03550 Oryza rufipogon ORUFI03G03550 I
ORUFI08G26340 Oryza rufipogon ORUFI08G26340 I
OS02G0820500 Oryza sativa OS02G0820500 I
OS03G0149000 Oryza sativa OS03G0149000 I
OS03G0149100 Oryza sativa OS03G0149100 I
OS08G0563400 Oryza sativa OS08G0563400 I
Pavir.Aa00097 Panicum virgatum Pavir.Aa00097 I
Pavir.Ia04220 Panicum virgatum Pavir.Ia04220 I
Pavir.Ib00282 Panicum virgatum Pavir.Ib00282 I
Pavir.Ib00283 Panicum virgatum Pavir.Ib00283 I
Pavir.J03376 Panicum virgatum Pavir.J03376 I
Pavir.J24246 Panicum virgatum Pavir.J24246 I
Pavir.J39638 Panicum virgatum Pavir.J39638 I
POPTR_0002s04200 Populus trichocarpa POPTR_0002s04200 I
SapurV1A.0006s0970 Salix purpurea SapurV1A.0006s0970 I
Sb01g046990 Sorghum bicolor Sb01g046990 I
Sb01g047000 Sorghum bicolor Sb01g047000 I
Sb04g037550 Sorghum bicolor Sb04g037550 I
Si019578m.g Setaria italica Si019578m.g I
Si037727m.g Setaria italica Si037727m.g I
Si040019m.g Setaria italica Si040019m.g I
Thhalv10006226m.g Eutrema salsugineum Thhalv10006226m.g I
Traes_4AL_3BA1D51E2 Triticum aestivum Traes_4AL_3BA1D51E2 N
Traes_4AL_CAF4E16B5 Triticum aestivum Traes_4AL_CAF4E16B5 I
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I
Traes_4BL_F71DE14F7 Triticum aestivum Traes_4BL_F71DE14F7 N
Traes_4BS_5D9291539 Triticum aestivum Traes_4BS_5D9291539 I
Traes_4BS_B43A99154 Triticum aestivum Traes_4BS_B43A99154 N
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I
Traes_4DS_11C3B0459 Triticum aestivum Traes_4DS_11C3B0459 I
Traes_6AL_D6045E37C Triticum aestivum Traes_6AL_D6045E37C I
Traes_6DL_850266B2A Triticum aestivum Traes_6DL_850266B2A I
TRIUR3_01477 Triticum urartu TRIUR3_01477 I
TRIUR3_07751 Triticum urartu TRIUR3_07751 I
VIT_07s0005g03020 Vitis vinifera VIT_07s0005g03020 I