CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

PIIN_05295 *(Piriformospora indica)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00046 (Homeobox)	IPR001356	PIIN_05295	T222383_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
YHP1 M02191_2.00	Saccharomyces cerevisiae	NWWATKRNN	NNYMATWWN	PBM Weirauch et al.(2014) pTH6381	0.731	0.491
YHP1 M08423_2.00	Saccharomyces cerevisiae	TAATTG	CAATTA	ChIP-chip Mathelier et al.(2014) MA0426.1	0.731	0.491
YHP1 M08573_2.00	Saccharomyces cerevisiae	WNTAATTR	YAATTANW	Misc DeBoer et al.(2011) YDR451C_716	0.731	0.491
YHP1 M10797_2.00	Saccharomyces cerevisiae	Transfac license required	Transfac license required	Transfac Matys et al.(2006) F$YHP1_01	0.731	0.491
YOX1 M00058_2.00	Saccharomyces cerevisiae	HTWAATTR	YAATTWAD	PBM Badis et al.(2008) YOX1_2073	0.705	0.456
YOX1 M01552_2.00	Saccharomyces cerevisiae	BWWATDR	YHATWWV	PBM Zhu et al.(2009) Yox1	0.705	0.456
YOX1 M07487_2.00	Saccharomyces cerevisiae	YTAATTWN	NWAATTAR	PBM, CSA and or DIP-chip Mathelier et al.(2014) MA0433.1	0.705	0.456
YOX1 M08575_2.00	Saccharomyces cerevisiae	YTAATTWN	NWAATTAR	Misc DeBoer et al.(2011) YML027W_498	0.705	0.456
For this family, TFs with SR scores > 0.599* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
CCA71356	Homeodomain	51	107	RRTRRRISESQLAALETLFGRTTHPSQAERDVLAKSINMEVKNVTIWFQNRRQAARK

Links
Other Homeodomain family TFs
Other *Piriformospora indica* TFs

79 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ALUE_0000590301	Ascaris lumbricoides	ALUE_0000590301	N	0.000
ASIM_0001676401	Anisakis simplex	ASIM_0001676401	N	0.000
ASU_04966	Ascaris suum	ASU_04966	N	0.000
Bm4541	Brugia malayi	Bm4541	N	0.000
CBG10038	Caenorhabditis briggsae	CBG10038	N	0.000
CBN24253	Caenorhabditis brenneri	CBN24253	N	0.000
CJA06713	Caenorhabditis japonica	CJA06713	N	0.000
CRE25566	Caenorhabditis remanei	CRE25566	N	0.000
DME_0000389301	Dracunculus medinensis	DME_0000389301	N	0.000
EEL_0000246901	Elaeophora elaphi	EEL_0000246901	N	0.000
EVEC_0000342301	Enterobius vermicularis	EVEC_0000342301	N	0.000
gei-13	Caenorhabditis elegans	WBGene00001570	N	0.000
Hba_11216	Heterorhabditis bacteriophora	Hba_11216	N	0.000
HCOI00039700	Haemonchus contortus	HCOI00039700	N	0.000
L596_g10637	Steinernema carpocapsae	L596_g10637	N	0.000
L889_g22347	Steinernema feltiae	L889_g22347	N	0.000
L892_g20284	Steinernema scapterisci	L892_g20284	N	0.000
L893_g18581	Steinernema glaseri	L893_g18581	N	0.000
L898_g16670	Steinernema monticolum	L898_g16670	N	0.000
LOAG_17673	Loa loa	LOAG_17673	N	0.000
nAv.1.0.1.g09085	Acanthocheilonema viteae	nAv.1.0.1.g09085	N	0.000
nDi.2.2.2.g00142	Dirofilaria immitis	nDi.2.2.2.g00142	N	0.000
nLs.2.1.2.g08165	Litomosoides sigmodontis	nLs.2.1.2.g08165	N	0.000
nOo.2.0.1.g06019	Onchocerca ochengi	nOo.2.0.1.g06019	N	0.000
SMUV_0000711101	Syphacia muris	SMUV_0000711101	N	0.000
TCLT_0000679601	Thelazia callipaeda	TCLT_0000679601	N	0.000
WBGene00245587	Onchocerca volvulus	WBGene00245587	N	0.000