PMAA_076490 (Talaromyces marneffei)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 PMAA_076490 T222447_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATEG_04171
M02059_2.00 		Aspergillus terreus
BWWATKRNNN
NNNYMATWWV		 PBM
Weirauch et al.(2014)
pTH5871 		0.849 0.895
YOX1
M00058_2.00 		Saccharomyces cerevisiae
HTWAATTR
YAATTWAD		 PBM
Badis et al.(2008)
YOX1_2073 		0.627 0.474
YOX1
M01552_2.00 		Saccharomyces cerevisiae
BWWATDR
YHATWWV		 PBM
Zhu et al.(2009)
Yox1 		0.627 0.474
YOX1
M07487_2.00 		Saccharomyces cerevisiae
YTAATTWN
NWAATTAR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0433.1 		0.627 0.474
YOX1
M08575_2.00 		Saccharomyces cerevisiae
YTAATTWN
NWAATTAR		 Misc
DeBoer et al.(2011)
YML027W_498 		0.627 0.474
YHP1
M02191_2.00 		Saccharomyces cerevisiae
NWWATKRNN
NNYMATWWN		 PBM
Weirauch et al.(2014)
pTH6381 		0.613 0.421
YHP1
M08423_2.00 		Saccharomyces cerevisiae
TAATTG
CAATTA		 ChIP-chip
Mathelier et al.(2014)
MA0426.1 		0.613 0.421
YHP1
M08573_2.00 		Saccharomyces cerevisiae
WNTAATTR
YAATTANW		 Misc
DeBoer et al.(2011)
YDR451C_716 		0.613 0.421
YHP1
M10797_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$YHP1_01 		0.613 0.421
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EEA26588 Homeodomain 55 111

Links

Other Homeodomain family TFs
Other Talaromyces marneffei TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30204.m001816 Ricinus communis 30204.m001816 I 0.000
Aquca_034_00180 Aquilegia coerulea Aquca_034_00180 I 0.000
BGIOSGA005408 Oryza indica BGIOSGA005408 I 0.000
Bo7g003890 Brassica oleracea Bo7g003890 I 0.000
Bostr.7903s0150 Boechera stricta Bostr.7903s0150 I 0.000
BRADI3G54640 Brachypodium distachyon BRADI3G54640 I 0.000
Cagra.0338s0008 Capsella grandiflora Cagra.0338s0008 I 0.000
Cagra.1225s0008 Capsella grandiflora Cagra.1225s0008 I 0.000
Carubv10007459m.g Capsella rubella Carubv10007459m.g I 0.000
Carubv10013621m.g Capsella rubella Carubv10013621m.g I 0.000
cassava2968.m1 Manihot esculenta cassava2968.m1 I 0.000
cassava34241.m1 Manihot esculenta cassava34241.m1 I 0.000
Ca_07691 Cicer arietinum Ca_07691 I 0.000
Ca_12298 Cicer arietinum Ca_12298 I 0.000
Ciclev10019585m.g Citrus clementina Ciclev10019585m.g I 0.000
Cla002793 Citrullus lanatus Cla002793 I 0.000
Cla015231 Citrullus lanatus Cla015231 I 0.000
Cucsa.078700 Cucumis sativus Cucsa.078700 I 0.000
evm.TU.supercontig_8.199 Carica papaya evm.TU.supercontig_8.199 I 0.000
gene08411-v1.0-hybrid Fragaria vesca gene08411-v1.0-hybrid I 0.000
GLYMA02G19000 Glycine max GLYMA02G19000 I 0.000
GLYMA03G32747 Glycine max GLYMA03G32747 I 0.000
GLYMA10G04890 Glycine max GLYMA10G04890 I 0.000
GLYMA11G05810 Glycine max GLYMA11G05810 I 0.000
GLYMA13G19250 Glycine max GLYMA13G19250 I 0.000
Gorai.001G183400 Gossypium raimondii Gorai.001G183400 I 0.000
Gorai.001G234900 Gossypium raimondii Gorai.001G234900 I 0.000
Gorai.007G151900 Gossypium raimondii Gorai.007G151900 I 0.000
GRMZM2G030744 Zea mays GRMZM2G030744 I 0.000
GSMUA_Achr1G16830_001 Musa acuminata GSMUA_Achr1G16830_001 I 0.000
GSMUA_Achr6G30080_001 Musa acuminata GSMUA_Achr6G30080_001 I 0.000
LPERR02G30060 Leersia perrieri LPERR02G30060 I 0.000
Lus10011899.g Linum usitatissimum Lus10011899.g I 0.000
Lus10022833.g Linum usitatissimum Lus10022833.g I 0.000
MDP0000289642 Malus domestica MDP0000289642 I 0.000
mgf008404m Mimulus guttatus mgf008404m I 0.000
MTR_1g069155 Medicago truncatula MTR_1g069155 I 0.000
MTR_7g099540 Medicago truncatula MTR_7g099540 I 0.000
OB02G43130 Oryza brachyantha OB02G43130 I 0.000
OGLUM02G37650 Oryza glumaepatula OGLUM02G37650 I 0.000
OLONG_013198 Oryza longistaminata OLONG_013198 I 0.000
OMERI02G34410 Oryza meridionalis OMERI02G34410 I 0.000
ONIVA02G38510 Oryza nivara ONIVA02G38510 I 0.000
OPUNC02G33630 Oryza punctata OPUNC02G33630 I 0.000
orange1.1g014090m.g Citrus sinensis orange1.1g014090m.g I 0.000
ORGLA02G0316800 Oryza glaberrima ORGLA02G0316800 I 0.000
ORUFI02G37990 Oryza rufipogon ORUFI02G37990 I 0.000
OS02G0805250 Oryza sativa OS02G0805250 I 0.000
Pavir.Ab03239 Panicum virgatum Pavir.Ab03239 I 0.000
Pavir.J11618 Panicum virgatum Pavir.J11618 I 0.000
PGSC0003DMG400018950 Solanum tuberosum PGSC0003DMG400018950 I 0.000
PIF1 Arabidopsis thaliana AT2G20180 D 0.000
PIL5 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3002562 I 0.000
PK06970.1 Cannabis sativa PK06970.1 I 0.000
POPTR_0002s25410 Populus trichocarpa POPTR_0002s25410 I 0.000
PRUPE_ppa004070mg Prunus persica PRUPE_ppa004070mg I 0.000
SapurV1A.0937s0140 Salix purpurea SapurV1A.0937s0140 I 0.000
Sb04g036450 Sorghum bicolor Sb04g036450 I 0.000
Si017762m.g Setaria italica Si017762m.g I 0.000
Solyc09g063010.2 Solanum lycopersicum Solyc09g063010.2 I 0.000
TCM_003125 Theobroma cacao TCM_003125 I 0.000
Thhalv10001974m.g Eutrema salsugineum Thhalv10001974m.g I 0.000