Alligator_sinensis_CCG008081.1 (Alligator sinensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Alligator_sinensis_CCG008081.1 T225201_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG008081.1 Homeodomain 144 156

Links

Other Homeodomain family TFs
Other Alligator sinensis TFs

845 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL013896 Aedes aegypti AAEL013896 I
AAH84196 Xenopus laevis AAH84196 I
AALB009485 Anopheles albimanus AALB009485 I
Aan_R014474 Calypte anna Aan_R014474 I
AARA004719 Anopheles arabiensis AARA004719 I
AATE010695 Anopheles atroparvus AATE010695 I
ACEP19585 Atta cephalotes ACEP19585 I
ACHR000067 Anopheles christyi ACHR000067 I
ACOM037505 Anopheles coluzzii ACOM037505 I
ACUA025512 Anopheles culicifacies ACUA025512 I
ACYPI000365 Acyrthosiphon pisum ACYPI000365 I
ACYPI003759 Acyrthosiphon pisum ACYPI003759 I
ACYPI005550 Acyrthosiphon pisum ACYPI005550 I
ACYPI008450 Acyrthosiphon pisum ACYPI008450 I
ADAC007516 Anopheles darlingi ADAC007516 I
ADIR002761 Anopheles dirus ADIR002761 I
AEPI002385 Anopheles epiroticus AEPI002385 I
AFAF011208 Anopheles farauti AFAF011208 I
Afo_R008709 Aptenodytes forsteri Afo_R008709 I
AFUN009864 Anopheles funestus AFUN009864 I
AGAP002902 Anopheles gambiae AGAP002902 I
Alligator_sinensis_CCG001823.1 Alligator sinensis Alligator_sinensis_CCG001823.1 I
Alligator_sinensis_CCG008910.1 Alligator sinensis Alligator_sinensis_CCG008910.1 I
AMAM019778 Anopheles maculatus AMAM019778 I
AMEC018109 Anopheles melas AMEC018109 I
AMEM015931 Anopheles merus AMEM015931 I
AMIN000723 Anopheles minimus AMIN000723 I
ANCCAN_20978 Ancylostoma caninum ANCCAN_20978 I
Aqu1.215833 Amphimedon queenslandica Aqu1.215833 I
Aqu1.215834 Amphimedon queenslandica Aqu1.215834 I
Aqu1.229767 Amphimedon queenslandica Aqu1.229767 I
AQUA009305 Anopheles quadriannulatus AQUA009305 I
ASIM_0001604001 Anisakis simplex ASIM_0001604001 I
ASTEI00079 Anopheles stephensi ASTEI00079 I
ASU_13433 Ascaris suum ASU_13433 I
BGIBMGA010110 Bombyx mori BGIBMGA010110 I
BGLB014287 Biomphalaria glabrata BGLB014287 I
Bm3575 Brugia malayi Bm3575 I
Brh_R010414 Buceros rhinoceros Brh_R010414 I
BTMF_0000404601 Brugia timori BTMF_0000404601 I
CapteG179368 Capitella teleta CapteG179368 I
CBN31444 Caenorhabditis brenneri CBN31444 I
Cflo_07183--XP_392838.3_APIME Camponotus floridanus Cflo_07183--XP_392838.3_APIME I
CGI_10000594 Crassostrea gigas CGI_10000594 I
CGI_10018464 Crassostrea gigas CGI_10018464 I
CLEC002594 Cimex lectularius CLEC002594 I
Cmyd_10005540 Chelonia mydas Cmyd_10005540 I
CPIJ002563 Culex quinquefasciatus CPIJ002563 I
CpipJ_CPIJ002563 Culex pipiens CpipJ_CPIJ002563 I
D915_03789 Fasciola hepatica D915_03789 I
D917_09719 Trichinella nativa D917_09719 I
D918_00298 Trichuris suis D918_00298 I
DAPPUDRAFT_304115 Daphnia pulex DAPPUDRAFT_304115 I
ECPE_0001832001 Echinostoma caproni ECPE_0001832001 I
EEL_0000707501 Elaeophora elaphi EEL_0000707501 I
EFV62078 Trichinella spiralis EFV62078 I
ENSAMEG00000002899 Ailuropoda melanoleuca ENSAMEG00000002899 I
ENSAMXG00000017275 Astyanax mexicanus ENSAMXG00000017275 I
ENSAMXG00000018339 Astyanax mexicanus ENSAMXG00000018339 I
ENSAMXG00000019219 Astyanax mexicanus ENSAMXG00000019219 I
ENSAPLG00000003924 Anas platyrhynchos ENSAPLG00000003924 I
ENSCSAG00000018094 Chlorocebus sabaeus ENSCSAG00000018094 I
ENSCSAVG00000006480 Ciona savignyi ENSCSAVG00000006480 I
ENSGACG00000003171 Gasterosteus aculeatus ENSGACG00000003171 I
ENSGACG00000016858 Gasterosteus aculeatus ENSGACG00000016858 I
ENSGMOG00000000297 Gadus morhua ENSGMOG00000000297 I
ENSGMOG00000005844 Gadus morhua ENSGMOG00000005844 I
ENSGMOG00000013964 Gadus morhua ENSGMOG00000013964 I
ENSLACG00000007810 Latimeria chalumnae ENSLACG00000007810 I
ENSLOCG00000012872 Lepisosteus oculatus ENSLOCG00000012872 I
ENSMEUG00000001823 Macropus eugenii ENSMEUG00000001823 I
ENSMPUG00000008776 Mustela putorius furo ENSMPUG00000008776 I
ENSNLEG00000011859 Nomascus leucogenys ENSNLEG00000011859 I
ENSOANG00000030959 Ornithorhynchus anatinus ENSOANG00000030959 I
ENSOARG00000004662 Ovis aries ENSOARG00000004662 I
ENSONIG00000001557 Oreochromis niloticus ENSONIG00000001557 I
ENSONIG00000010360 Oreochromis niloticus ENSONIG00000010360 I
ENSONIG00000014036 Oreochromis niloticus ENSONIG00000014036 I
ENSONIG00000015035 Oreochromis niloticus ENSONIG00000015035 I
ENSP00000341551-D1 Bos grunniens ENSP00000341551-D1 I
ENSP00000381452 Macaca fascicularis ENSP00000381452 I
ENSPANG00000024703 Papio anubis ENSPANG00000024703 I
ENSPFOG00000018987 Poecilia formosa ENSPFOG00000018987 I
ENSPFOG00000019807 Poecilia formosa ENSPFOG00000019807 I
ENSPFOG00000019867 Poecilia formosa ENSPFOG00000019867 I
ENSPMAG00000008404 Petromyzon marinus ENSPMAG00000008404 I
ENSPMAG00000009414 Petromyzon marinus ENSPMAG00000009414 I
ENSPPYG00000009165 Pongo abelii ENSPPYG00000009165 I
ENSPSIG00000014614 Pelodiscus sinensis ENSPSIG00000014614 I
ENSSHAG00000010344 Sarcophilus harrisii ENSSHAG00000010344 I
ENSSTOG00000028580 Ictidomys tridecemlineatus ENSSTOG00000028580 I
ENSTSYG00000009792 Tarsius syrichta ENSTSYG00000009792 I
ENSXMAG00000005051 Xiphophorus maculatus ENSXMAG00000005051 I
ENSXMAG00000015245 Xiphophorus maculatus ENSXMAG00000015245 I
EVEC_0000355201 Enterobius vermicularis EVEC_0000355201 I
e_gw.452.68.1 Branchiostoma floridae e_gw.452.68.1 I
fgenesh2_pg.scaffold_230000050 Branchiostoma floridae fgenesh2_pg.scaffold_230000050 I
GA14643 Drosophila pseudoobscura FBgn0074670 I
GB50071 Apis mellifera GB50071 I
gb:cr929477 Tetraodon nigroviridis ENSTNIG00000003193 I
gb:cr929477 Takifugu rubripes ENSTRUG00000011769 I
GE10952 Drosophila yakuba FBgn0228782 I
GF22974 Drosophila ananassae FBgn0099968 I
Gfo_R011803 Geospiza fortis Gfo_R011803 I
Gfo_R016223 Geospiza fortis Gfo_R016223 I
GG11819 Drosophila erecta FBgn0104114 I
GH18642 Drosophila grimshawi FBgn0126109 I
GI23400 Drosophila mojavensis FBgn0146126 I
GJ23092 Drosophila virilis FBgn0210194 I
GK11724 Drosophila willistoni FBgn0213735 I
GL23637 Drosophila persimilis FBgn0161227 I
GM16436 Drosophila sechellia FBgn0171351 I
GPLIN_000772200 Globodera pallida GPLIN_000772200 I
GPUH_0001329001 Gongylonema pulchrum GPUH_0001329001 I
HCOI00676200 Haemonchus contortus HCOI00676200 I
HelroG76435 Helobdella robusta HelroG76435 I
HelroG88197 Helobdella robusta HelroG88197 I
HHAL000393-PA Halyomorpha halys HHAL000393-PA I
HHAL000394-PA Halyomorpha halys HHAL000394-PA I
HMEL002203 Heliconius melpomene HMEL002203 I
HPBE_0001599301 Heligmosomoides bakeri HPBE_0001599301 I
Hsal_09633--XP_392838.3_APIME Harpegnathos saltator Hsal_09633--XP_392838.3_APIME I
ISCW018468 Ixodes scapularis ISCW018468 I
KGM_12572 Danaus plexippus KGM_12572 I
L596_g15 Steinernema carpocapsae L596_g15 I
L798_13939 Zootermopsis nevadensis L798_13939 I
L889_g22387 Steinernema feltiae L889_g22387 I
L889_g28104 Steinernema feltiae L889_g28104 I
L889_g6780 Steinernema feltiae L889_g6780 I
L892_g27454 Steinernema scapterisci L892_g27454 I
L893_g15056 Steinernema glaseri L893_g15056 I
L893_g344 Steinernema glaseri L893_g344 I
L898_g17086 Steinernema monticolum L898_g17086 I
L898_g26477 Steinernema monticolum L898_g26477 I
LCUP007928 Lucilia cuprina LCUP007928 I
LLOJ008806 Lutzomyia longipalpis LLOJ008806 I
LOAG_08923 Loa loa LOAG_08923 I
LotgiG131078 Lottia gigantea LotgiG131078 I
maker-nMf.1.1.scaf02670-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf02670-augustus-gene-0.3 I
MCINX014520 Melitaea cinxia MCINX014520 I
MDOA012885 Musca domestica MDOA012885 I
Med Drosophila melanogaster FBgn0011655 D
Minc05381 Meloidogyne incognita Minc05381 I
Minc06628 Meloidogyne incognita Minc06628 I
ML02191a Mnemiopsis leidyi ML02191a I
Myotis_brandtii_Smad4_10005924 Myotis brandtii Myotis_brandtii_Smad4_10005924 I
nAv.1.0.1.g00430 Acanthocheilonema viteae nAv.1.0.1.g00430 I
nDi.2.2.2.g01429 Dirofilaria immitis nDi.2.2.2.g01429 I
NEMVEDRAFT_v1g18576 Nematostella vectensis NEMVEDRAFT_v1g18576 I
NEMVEDRAFT_v1g248037 Nematostella vectensis NEMVEDRAFT_v1g248037 I
nLs.2.1.2.g01457 Litomosoides sigmodontis nLs.2.1.2.g01457 I
nOo.2.0.1.g00181 Onchocerca ochengi nOo.2.0.1.g00181 I
NV12984 Nasonia vitripennis NV12984 I
Ocbimv22032358m.g Octopus bimaculoides Ocbimv22032358m.g I
OESDEN_03018 Oesophagostomum dentatum OESDEN_03018 I
Ogr06720 Ophisaurus gracilis Ogr06720 I
Ogr14199 Ophisaurus gracilis Ogr14199 I
PHUM002670 Pediculus humanus PHUM002670 I
PPAI002168 Phlebotomus papatasi PPAI002168 I
Pvit_01119 Pogona vitticeps Pvit_01119 I
RPRC010188 Rhodnius prolixus RPRC010188 I
Sakowv30001112m.g Saccoglossus kowalevskii Sakowv30001112m.g I
si:dkey-222b8.1 Danio rerio ENSDARG00000045094 I
si:dkey-222b8.1 Gasterosteus aculeatus ENSGACG00000000538 I
si:dkey-222b8.1 Tetraodon nigroviridis ENSTNIG00000005007 I
si:dkey-222b8.1 Takifugu rubripes ENSTRUG00000004163 I
si:dkey-239n17.4 Danio rerio ENSDARG00000070428 I
SINV15516 Solenopsis invicta SINV15516 I
Sjc_0030450 Schistosoma japonicum Sjc_0030450 I
SMAD4 Anolis carolinensis ENSACAG00000010186 I
SMAD4 Bos taurus ENSBTAG00000006919 I
SMAD4 Canis familiaris ENSCAFG00000000164 I
SMAD4 Choloepus hoffmanni ENSCHOG00000000860 I
smad4 Ciona intestinalis ENSCING00000005559 I
SMAD4 Callithrix jacchus ENSCJAG00000001910 I
SMAD4 Cavia porcellus ENSCPOG00000006470 I
SMAD4 Danio rerio ENSDARG00000012649 I
SMAD4 Dasypus novemcinctus ENSDNOG00000005063 I
Smad4 Dipodomys ordii ENSDORG00000009089 I
SMAD4 Equus caballus ENSECAG00000017857 I
SMAD4 Echinops telfairi ENSETEG00000007750 I
SMAD4 Felis catus ENSFCAG00000005257 I
SMAD4 Homo sapiens ENSG00000141646 D
SMAD4 Gorilla gorilla ENSGGOG00000013662 I
SMAD4 Loxodonta africana ENSLAFG00000012595 I
SMAD4 Microcebus murinus ENSMICG00000017525 I
SMAD4 Myotis lucifugus ENSMLUG00000013944 I
SMAD4 Macaca mulatta ENSMMUG00000018334 I
SMAD4 Monodelphis domestica ENSMODG00000010995 I
Smad4 Mus musculus ENSMUSG00000024515 D
SMAD4 Ornithorhynchus anatinus ENSOANG00000008117 I
SMAD4 Oryctolagus cuniculus ENSOCUG00000003929 I
SMAD4 Otolemur garnettii ENSOGAG00000012081 I
SMAD4 Ochotona princeps ENSOPRG00000013601 I
SMAD4 Oryzias latipes ENSORLG00000007703 I
SMAD4 Pan troglodytes ENSPTRG00000010028 I
SMAD4 Pteropus vampyrus ENSPVAG00000004261 I
Smad4 Rattus norvegicus ENSRNOG00000051965 I
SMAD4 Sorex araneus ENSSARG00000013883 I
SMAD4 Sus scrofa ENSSSCG00000004524 I
SMAD4 Tupaia belangeri ENSTBEG00000014105 I
SMAD4 Tetraodon nigroviridis ENSTNIG00000009050 I
SMAD4 Takifugu rubripes ENSTRUG00000014045 I
SMAD4 Vicugna pacos ENSVPAG00000006757 I
smad4.1 Xenopus tropicalis XB-GENE-485691 I
smad4.1.L Xenopus laevis XB-GENE-865543 I
smad4.2.L Xenopus laevis XB-GENE-6256010 I
smad4.2.S Xenopus laevis XB-GENE-5995204 I
smad4a Danio rerio ENSDARG00000075226 I
smad4a Gasterosteus aculeatus ENSGACG00000007495 I
smad4a Oryzias latipes ENSORLG00000005020 I
SMAR013850 Strigamia maritima SMAR013850 I
Smp_033950 Schistosoma mansoni Smp_033950 I
SMTD_0002197901 Schistosoma mattheei SMTD_0002197901 I
SMU15001649 Schmidtea mediterranea SMU15001649 N
SMU15015494 Schmidtea mediterranea SMU15015494 I
SPU_004287 Strongylocentrotus purpuratus SPU_004287 I
SPU_017971 Strongylocentrotus purpuratus SPU_017971 I
SROB_0000384401 Schistosoma rodhaini SROB_0000384401 I
SVUK_0000938201 Strongylus vulgaris SVUK_0000938201 I
T265_11013 Opisthorchis viverrini T265_11013 I
TC010848 Tribolium castaneum TC010848 I
TCLT_0000917301 Thelazia callipaeda TCLT_0000917301 I
TELCIR_19676 Teladorsagia circumcincta TELCIR_19676 I
tetur10g00380 Tetranychus urticae tetur10g00380 I
tetur10g00400 Tetranychus urticae tetur10g00400 I
TMUE_s0006012700 Trichuris muris TMUE_s0006012700 I
TRE_0001987301 Trichobilharzia regenti TRE_0001987301 I
TriadG30731 Trichoplax adhaerens TriadG30731 I
TTRE_0000855901 Trichuris trichiura TTRE_0000855901 I
WBGene00241622 Onchocerca volvulus WBGene00241622 I
WUBG_02880 Wuchereria bancrofti WUBG_02880 I
XP_002161797.1 Hydra magnipapillata XP_002161797.1 I
YQE_06624 Dendroctonus ponderosae YQE_06624 I
YQE_08737 Dendroctonus ponderosae YQE_08737 I