Gorai.004G274200 (Gossypium raimondii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Gorai.004G274200 T228709_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G274200.1 Homeodomain 278 331

Links

Other Homeodomain family TFs
Other Gossypium raimondii TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29848.m004652 Ricinus communis 29848.m004652 N 0.775
Aquca_001_00810 Aquilegia coerulea Aquca_001_00810 N 0.710
BGIOSGA023211 Oryza indica BGIOSGA023211 N 0.666
Bo9g171420 Brassica oleracea Bo9g171420 N 0.726
Bostr.23997s0022 Boechera stricta Bostr.23997s0022 N 0.723
Bra008975 Brassica rapa Bra008975 N 0.726
BRADI1G36770 Brachypodium distachyon BRADI1G36770 N 0.634
BRADI1G58817 Brachypodium distachyon BRADI1G58817 N 0.641
Cagra.7526s0026 Capsella grandiflora Cagra.7526s0026 N 0.736
Carubv10002492m.g Capsella rubella Carubv10002492m.g N 0.736
cassava18449.valid.m1 Manihot esculenta cassava18449.valid.m1 N 0.777
chr1.CM0442.170.nd Lotus japonicus chr1.CM0442.170.nd N 0.681
Ciclev10010768m.g Citrus clementina Ciclev10010768m.g N 0.687
Cla021272 Citrullus lanatus Cla021272 N 0.757
Cucsa.310460 Cucumis sativus Cucsa.310460 N 0.757
evm.TU.supercontig_115.10 Carica papaya evm.TU.supercontig_115.10 N 0.700
gene11668-v1.0-hybrid Fragaria vesca gene11668-v1.0-hybrid N 0.677
GLYMA04G07230 Glycine max GLYMA04G07230 N 0.665
GLYMA06G07330 Glycine max GLYMA06G07330 N 0.665
GSMUA_Achr7G08370_001 Musa acuminata GSMUA_Achr7G08370_001 N 0.677
Lus10002029.g Linum usitatissimum Lus10002029.g N 0.658
Lus10002899.g Linum usitatissimum Lus10002899.g N 0.658
MDP0000119866 Malus domestica MDP0000119866 N 0.727
MDP0000202143 Malus domestica MDP0000202143 N 0.716
mgf000632m Mimulus guttatus mgf000632m N 0.623
MLOC_45474 Hordeum vulgare MLOC_45474 N 0.637
OB06G27850 Oryza brachyantha OB06G27850 N 0.687
OBART06G20210 Oryza barthii OBART06G20210 N 0.666
OCP3 Arabidopsis lyrata fgenesh2_kg.6__1093__AT5G11270.1 N 0.736
OCP3 Arabidopsis thaliana AT5G11270 N 0.736
OCP3 Vitis vinifera VIT_04s0008g05190 N 0.744
OGLUM06G21270 Oryza glumaepatula OGLUM06G21270 N 0.666
OLONG_013537 Oryza longistaminata OLONG_013537 N 0.666
OMERI06G20820 Oryza meridionalis OMERI06G20820 N 0.668
ONIVA06G23990 Oryza nivara ONIVA06G23990 N 0.666
OPUNC06G18430 Oryza punctata OPUNC06G18430 N 0.668
orange1.1g040593m.g Citrus sinensis orange1.1g040593m.g N 0.687
ORUFI06G21620 Oryza rufipogon ORUFI06G21620 N 0.666
OS06G0601000 Oryza sativa OS06G0601000 N 0.666
PGSC0003DMG400020785 Solanum tuberosum PGSC0003DMG400020785 N 0.664
PK00680.1 Cannabis sativa PK00680.1 N 0.753
Pm004594 Prunus mume Pm004594 N 0.728
PRUPE_ppa007560mg Prunus persica PRUPE_ppa007560mg N 0.728
Solyc08g061140.2 Solanum lycopersicum Solyc08g061140.2 N 0.671
TCM_038389 Theobroma cacao TCM_038389 N 0.820
Thhalv10013990m.g Eutrema salsugineum Thhalv10013990m.g N 0.726
Traes_7AL_0FFE02C4C Triticum aestivum Traes_7AL_0FFE02C4C N 0.637
Traes_7BL_E2E7AA383 Triticum aestivum Traes_7BL_E2E7AA383 N 0.637
Traes_7DL_613F5240E Triticum aestivum Traes_7DL_613F5240E N 0.637