MDP0000322550 (Malus domestica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 MDP0000322550 T229075_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANL2
M02046_2.00 		Arabidopsis thaliana
NCATTWATKNN
NNMATWAATGN		 PBM
Weirauch et al.(2014)
pTH8244 		0.834 0.842
ANL2
M06919_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_col_a 		0.834 0.842
ANL2
M06920_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_colamp_a 		0.834 0.842
HDG1
M06917_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_col100_a 		0.809 0.772
HDG1
M06918_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_colamp_a 		0.809 0.772
PK24181.1
M01252_2.00 		Cannabis sativa
NNNNNNNHDH
DHDNNNNNNN		 PBM
Lambert et al.(2019)
pTH11300 		0.800 0.754
HDG11
M02039_2.00 		Arabidopsis thaliana
DCATTWAWKD
HMWTWAATGH		 PBM
Weirauch et al.(2014)
pTH7664 		0.784 0.737
HDG11
M06904_2.00 		Arabidopsis thaliana
DCATTWAWTRH
DYAWTWAATGH		 Dap-seq
OMalley et al.(2016)
EDT1_col 		0.784 0.737
ATML1
M02048_2.00 		Arabidopsis thaliana
NNHNRHYRNN
NNYRDYNDNN		 PBM
Weirauch et al.(2014)
pTH8203 		0.778 0.789
PDF2
M06921_2.00 		Arabidopsis thaliana
WNVGAATATTCYHTN
NADRGAATATTCBNW		 Dap-seq
OMalley et al.(2016)
PDF2_col 		0.778 0.789
ATML1
M10626_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ML1_01 		0.778 0.789
PDF2
M10625_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PDF2_01 		0.778 0.789
HDG7
M06931_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG7_col_a 		0.772 0.772
HDG7
M10629_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG7_01 		0.772 0.772
HDG9
M10628_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG9_01 		0.769 0.649
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000322550 Homeodomain 55 111

Links

Other Homeodomain family TFs
Other Malus domestica TFs

617 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL001428 Aedes aegypti AAEL001428 I 0.000
AALB005115 Anopheles albimanus AALB005115 I 0.000
AARA008036 Anopheles arabiensis AARA008036 I 0.000
AATE001925 Anopheles atroparvus AATE001925 I 0.000
ACHR004688 Anopheles christyi ACHR004688 I 0.000
ACOM025686 Anopheles coluzzii ACOM025686 I 0.000
ACUA018337 Anopheles culicifacies ACUA018337 I 0.000
ADAC002255 Anopheles darlingi ADAC002255 I 0.000
ADIR007247 Anopheles dirus ADIR007247 I 0.000
AFAF013289 Anopheles farauti AFAF013289 I 0.000
AFUN009268 Anopheles funestus AFUN009268 I 0.000
AGAP007450 Anopheles gambiae AGAP007450 I 0.000
AMEC000625 Anopheles melas AMEC000625 I 0.000
AMEM007511 Anopheles merus AMEM007511 I 0.000
AMIN010454 Anopheles minimus AMIN010454 I 0.000
AQUA004460 Anopheles quadriannulatus AQUA004460 I 0.000
ASIS014948 Anopheles sinensis ASIS014948 I 0.000
ASTEI01378 Anopheles stephensi ASTEI01378 I 0.000
CPIJ017595 Culex quinquefasciatus CPIJ017595 I 0.000
CpipJ_CPIJ017595 Culex pipiens CpipJ_CPIJ017595 I 0.000
DAPPUDRAFT_347250 Daphnia pulex DAPPUDRAFT_347250 N 0.000
ENSONIG00000002623 Oreochromis niloticus ENSONIG00000002623 I 0.000
ENSPFOG00000014160 Poecilia formosa ENSPFOG00000014160 I 0.000
ENSXMAG00000003593 Xiphophorus maculatus ENSXMAG00000003593 I 0.000
ENSXMAG00000014241 Xiphophorus maculatus ENSXMAG00000014241 I 0.000
GA10830 Drosophila pseudoobscura FBgn0070886 I 0.000
GD10199 Drosophila simulans FBgn0181974 I 0.000
GD10200 Drosophila simulans FBgn0181975 I 0.000
GE23399 Drosophila yakuba FBgn0240591 I 0.000
GF11221 Drosophila ananassae FBgn0088261 I 0.000
GG10686 Drosophila erecta FBgn0102992 I 0.000
GH19996 Drosophila grimshawi FBgn0127460 I 0.000
GI19174 Drosophila mojavensis FBgn0141913 I 0.000
GJ20236 Drosophila virilis FBgn0207376 I 0.000
GK21562 Drosophila willistoni FBgn0223554 I 0.000
GL10603 Drosophila persimilis FBgn0148213 I 0.000
GM20733 Drosophila sechellia FBgn0175614 I 0.000
Hey Drosophila melanogaster FBgn0027788 D 0.000
hey1 Oryzias latipes ENSORLG00000012953 I 0.000
HEYL Felis catus ENSFCAG00000010963 I 0.000
LCUP005888 Lucilia cuprina LCUP005888 I 0.000
LLOJ002069 Lutzomyia longipalpis LLOJ002069 I 0.000
LotgiG171867 Lottia gigantea LotgiG171867 I 0.000
MDOA011625 Musca domestica MDOA011625 I 0.000
Sjc_0014730 Schistosoma japonicum Sjc_0014730 N 0.000