LCUP015460 (Lucilia cuprina)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 LCUP015460 T229955_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.867 1.000
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.867 1.000
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.867 1.000
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.858 0.947
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.858 0.947
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.858 0.947
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.832 0.930
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.815 0.930
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.815 0.930
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.815 0.930
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.815 0.930
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.815 0.930
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.815 0.930
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.788 0.912
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LCUP015460-PA Homeodomain 2 61

Links

Other Homeodomain family TFs
Other Lucilia cuprina TFs

389 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000817201 Angiostrongylus cantonensis ACAC_0000817201 N 0.000
ACAC_0000857301 Angiostrongylus cantonensis ACAC_0000857301 N 0.000
ACOC_0000235301 Angiostrongylus costaricensis ACOC_0000235301 N 0.000
ACOC_0000653601 Angiostrongylus costaricensis ACOC_0000653601 N 0.000
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N 0.000
ALUE_0000605501 Ascaris lumbricoides ALUE_0000605501 N 0.000
ANCCAN_04253 Ancylostoma caninum ANCCAN_04253 N 0.000
ANCCAN_08230 Ancylostoma caninum ANCCAN_08230 I 0.000
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I 0.000
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I 0.000
ANCCAN_19939 Ancylostoma caninum ANCCAN_19939 N 0.000
ANCCAN_21637 Ancylostoma caninum ANCCAN_21637 N 0.000
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I 0.000
ANCCEY_04224 Ancylostoma ceylanicum ANCCEY_04224 N 0.000
ANCCEY_10464 Ancylostoma ceylanicum ANCCEY_10464 N 0.000
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N 0.000
ANCDUO_11855 Ancylostoma duodenale ANCDUO_11855 N 0.000
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I 0.000
ANCDUO_12352 Ancylostoma duodenale ANCDUO_12352 N 0.000
ANCDUO_24269 Ancylostoma duodenale ANCDUO_24269 N 0.000
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I 0.000
ANCDUO_26276 Ancylostoma duodenale ANCDUO_26276 N 0.000
ASIM_0000156001 Anisakis simplex ASIM_0000156001 N 0.000
ASIM_0001147101 Anisakis simplex ASIM_0001147101 N 0.000
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N 0.000
ASU_05752 Ascaris suum ASU_05752 N 0.000
ASU_05994 Ascaris suum ASU_05994 N 0.000
ASU_07820 Ascaris suum ASU_07820 N 0.000
ASU_09087 Ascaris suum ASU_09087 N 0.000
Bm6643 Brugia malayi Bm6643 N 0.000
Bm8632 Brugia malayi Bm8632 N 0.000
BTMF_0000229601 Brugia timori BTMF_0000229601 N 0.000
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.000
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.000
CBG09136 Caenorhabditis briggsae CBG09136 N 0.000
CBN25379 Caenorhabditis brenneri CBN25379 I 0.000
CJA04355 Caenorhabditis japonica CJA04355 N 0.000
CRE11852 Caenorhabditis remanei CRE11852 N 0.000
D917_09636 Trichinella nativa D917_09636 N 0.000
DICVIV_01337 Dictyocaulus viviparus DICVIV_01337 N 0.000
DICVIV_05502 Dictyocaulus viviparus DICVIV_05502 N 0.000
DME_0000590001 Dracunculus medinensis DME_0000590001 N 0.000
DME_0000779601 Dracunculus medinensis DME_0000779601 N 0.000
EEL_0000629001 Elaeophora elaphi EEL_0000629001 N 0.000
EFV62220 Trichinella spiralis EFV62220 N 0.000
EVEC_0000171701 Enterobius vermicularis EVEC_0000171701 N 0.000
GPUH_0000029001 Gongylonema pulchrum GPUH_0000029001 N 0.000
Hba_18326 Heterorhabditis bacteriophora Hba_18326 I 0.000
HCOI00417600 Haemonchus contortus HCOI00417600 N 0.000
HCOI01420700 Haemonchus contortus HCOI01420700 N 0.000
HCOI01550200 Haemonchus contortus HCOI01550200 N 0.000
HCOI02106600 Haemonchus contortus HCOI02106600 N 0.000
hmg-1.1 Caenorhabditis elegans WBGene00001971 N 0.000
hmg-4 Caenorhabditis elegans WBGene00001974 N 0.000
HPBE_0000066401 Heligmosomoides bakeri HPBE_0000066401 N 0.000
HPBE_0001796801 Heligmosomoides bakeri HPBE_0001796801 N 0.000
HPBE_0002310801 Heligmosomoides bakeri HPBE_0002310801 N 0.000
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I 0.000
HPLM_0000803901 Haemonchus placei HPLM_0000803901 N 0.000
HPLM_0001324601 Haemonchus placei HPLM_0001324601 N 0.000
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.000
L596_g28088 Steinernema carpocapsae L596_g28088 N 0.000
L596_g8199 Steinernema carpocapsae L596_g8199 N 0.000
L889_g16198 Steinernema feltiae L889_g16198 N 0.000
L889_g29516 Steinernema feltiae L889_g29516 N 0.000
L889_g6592 Steinernema feltiae L889_g6592 N 0.000
L889_g9094 Steinernema feltiae L889_g9094 N 0.000
L892_g19058 Steinernema scapterisci L892_g19058 N 0.000
L892_g23618 Steinernema scapterisci L892_g23618 N 0.000
L892_g2503 Steinernema scapterisci L892_g2503 N 0.000
L893_g23503 Steinernema glaseri L893_g23503 N 0.000
L893_g29974 Steinernema glaseri L893_g29974 N 0.000
L898_g23313 Steinernema monticolum L898_g23313 N 0.000
L898_g4830 Steinernema monticolum L898_g4830 N 0.000
L898_g7743 Steinernema monticolum L898_g7743 N 0.000
LOAG_08062 Loa loa LOAG_08062 N 0.000
LOAG_14354 Loa loa LOAG_14354 N 0.000
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.000
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.000
Minc03634 Meloidogyne incognita Minc03634 N 0.000
Minc04648 Meloidogyne incognita Minc04648 N 0.000
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.000
nAv.1.0.1.g09805 Acanthocheilonema viteae nAv.1.0.1.g09805 N 0.000
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.000
NBR_0001132501 Nippostrongylus brasiliensis NBR_0001132501 N 0.000
NBR_0001277401 Nippostrongylus brasiliensis NBR_0001277401 N 0.000
nDi.2.2.2.g04713 Dirofilaria immitis nDi.2.2.2.g04713 N 0.000
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.000
NECAME_10840 Necator americanus NECAME_10840 N 0.000
NECAME_16525 Necator americanus NECAME_16525 N 0.000
NECAME_17555 Necator americanus NECAME_17555 N 0.000
NECAME_17981 Necator americanus NECAME_17981 N 0.000
nLs.2.1.2.g02941 Litomosoides sigmodontis nLs.2.1.2.g02941 N 0.000
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.000
nOo.2.0.1.g01970 Onchocerca ochengi nOo.2.0.1.g01970 N 0.000
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.000
Ocbimv22006454m.g Octopus bimaculoides Ocbimv22006454m.g N 0.000
OESDEN_09619 Oesophagostomum dentatum OESDEN_09619 N 0.000
OFLC_0000496201 Onchocerca flexuosa OFLC_0000496201 N 0.000
PBANKA_060190 Plasmodium berghei PBANKA_060190 I 0.000
PCHAS_060370 Plasmodium chabaudi PCHAS_060370 I 0.000
PFL0145c Plasmodium falciparum PFL0145c I 0.000
PKH_130170 Plasmodium knowlesi PKH_130170 I 0.000
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.000
PPA02261 Pristionchus pacificus PPA02261 N 0.000
PPA06513 Pristionchus pacificus PPA06513 N 0.000
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N 0.000
PTRK_0001490800 Parastrongyloides trichosuri PTRK_0001490800 N 0.000
PVX_084190 Plasmodium vivax PVX_084190 I 0.000
PY05184 Plasmodium yoelii PY05184 I 0.000
RSKR_0000128800 Rhabditophanes kr3021 RSKR_0000128800 N 0.000
RSKR_0000269200 Rhabditophanes kr3021 RSKR_0000269200 N 0.000
RSKR_0000269500 Rhabditophanes kr3021 RSKR_0000269500 N 0.000
RSKR_0000587700 Rhabditophanes kr3021 RSKR_0000587700 N 0.000
RSKR_0000746900 Rhabditophanes kr3021 RSKR_0000746900 N 0.000
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N 0.000
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.000
scaffold164-EXSNAP2012.19 Pristionchus exspectatus scaffold164-EXSNAP2012.19 N 0.000
scaffold98-EXSNAP2012.51 Pristionchus exspectatus scaffold98-EXSNAP2012.51 N 0.000
SMUV_0000634201 Syphacia muris SMUV_0000634201 N 0.000
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N 0.000
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N 0.000
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N 0.000
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N 0.000
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N 0.000
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N 0.000
SVUK_0001398701 Strongylus vulgaris SVUK_0001398701 N 0.000
SVUK_0001798101 Strongylus vulgaris SVUK_0001798101 N 0.000
TA04735 Theileria annulata TA04735 I 0.000
TCNE_0000332201 Toxocara canis TCNE_0000332201 N 0.000
TCNE_0001025901 Toxocara canis TCNE_0001025901 N 0.000
TELCIR_02603 Teladorsagia circumcincta TELCIR_02603 N 0.000
TELCIR_05217 Teladorsagia circumcincta TELCIR_05217 N 0.000
TELCIR_22690 Teladorsagia circumcincta TELCIR_22690 N 0.000
TP03_0469 Theileria parva TP03_0469 I 0.000
WBGene00237022 Onchocerca volvulus WBGene00237022 N 0.000
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.000
WUBG_02390 Wuchereria bancrofti WUBG_02390 N 0.000