CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
chr1.CM0442.170.nd
(
Lotus japonicus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
chr1.CM0442.170.nd
T230803_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr1.CM0442.170.nd
Homeodomain
257
309
AQKRLKKAHVDTLERVYRRSKRPTNTMISSIVHVTNIPRRKVVKWFEDKRAED
Links
Other
Homeodomain
family TFs
Other
Lotus japonicus
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000020512
Astyanax mexicanus
ENSAMXG00000020512
N
ENSLOCG00000004596
Lepisosteus oculatus
ENSLOCG00000004596
N
ENSONIG00000017430
Oreochromis niloticus
ENSONIG00000017430
N
ENSPFOG00000007793
Poecilia formosa
ENSPFOG00000007793
N
ENSXMAG00000015457
Xiphophorus maculatus
ENSXMAG00000015457
N
zhx3
Danio rerio
ENSDARG00000019774
N
zhx3
Oryzias latipes
ENSORLG00000009397
N
zhx3
Takifugu rubripes
ENSTRUG00000000835
N