D917_07736 (Trichinella nativa)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 D917_07736 T233506_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.841 0.877
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.841 0.877
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.841 0.877
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.841 0.877
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.841 0.877
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.841 0.877
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.807 0.860
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.802 0.825
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.802 0.825
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.802 0.825
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.802 0.825
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.802 0.825
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.802 0.825
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.788 0.842
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
D917_07736 Homeodomain 258 317

Links

Other Homeodomain family TFs
Other Trichinella nativa TFs

387 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
20155_YOR140W Saccharomyces mikatae 20155_YOR140W I 0.000
20850_YOR140W Saccharomyces paradoxus 20850_YOR140W I 0.000
23912_Multiple Saccharomyces bayanus 23912_Multiple I 0.000
A1O1_04043 Capronia coronata A1O1_04043 N 0.000
A1O3_01459 Capronia epimyces A1O3_01459 N 0.000
A1O5_07765 Cladophialophora psammophila A1O5_07765 N 0.000
A1O7_05617 Cladophialophora yegresii A1O7_05617 N 0.000
A1O9_03914 Exophiala aquamarina A1O9_03914 N 0.000
AACERI_AaceriAFR136C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFR136C I 0.000
AB09304.1 Alternaria brassicicola AB09304.1 I 0.000
AFUA_4G04502 Aspergillus fumigatus CADAFUAG00001430 N 0.000
AGOS_AFR136C Ashbya gossypii AGOS_AFR136C I 0.000
AOL_s00043g47 Arthrobotrys oligospora AOL_s00043g47 N 0.000
ARB_06070 Arthroderma benhamiae ARB_06070 N 0.000
AUEXF2481DRAFT_4075 Aureobasidium subglaciale AUEXF2481DRAFT_4075 N 0.000
BBA_04216 Beauveria bassiana BBA_04216 N 0.000
Bcin02g02960 Botrytis cinerea Bcin02g02960 N 0.000
BDDG_07871 Blastomyces dermatitidis BDDG_07871 N 0.000
BN7_3033 Wickerhamomyces ciferrii BN7_3033 I 0.000
BN7_3380 Wickerhamomyces ciferrii BN7_3380 I 0.000
CADAFLAG00013433 Aspergillus flavus CADAFLAG00013433 N 0.000
CADANGAG00010969 Aspergillus niger CADANGAG00010969 N 0.000
CAGL0I07183g Candida glabrata CAGL0I07183g I 0.000
CANTEDRAFT_132848 Candida tenuis CANTEDRAFT_132848 I 0.000
CaO19.454 Candida albicans CaO19.454 I 0.000
CaO19.8085 Candida albicans CaO19.8085 I 0.000
CD36_31370 Candida dubliniensis CD36_31370 N 0.000
CIMG_08549 Coccidioides immitis CIMG_08549 N 0.000
CLUG_03610 Candida lusitaniae CLUG_03610 I 0.000
CLUG_03610 Clavispora lusitaniae CLUG_03610 I 0.000
CMQ_3588 Grosmannia clavigera CMQ_3588 N 0.000
COCC4DRAFT_83005 Bipolaris maydis COCC4DRAFT_83005 I 0.000
COCCADRAFT_105318 Bipolaris zeicola COCCADRAFT_105318 I 0.000
COCMIDRAFT_99053 Bipolaris oryzae COCMIDRAFT_99053 I 0.000
COCSADRAFT_293960 Bipolaris sorokiniana COCSADRAFT_293960 I 0.000
COCVIDRAFT_105959 Bipolaris victoriae COCVIDRAFT_105959 I 0.000
CORT_0D05240 Candida orthopsilosis CORT_0D05240 I 0.000
CPC735_062070 Coccidioides posadasii CPC735_062070 N 0.000
CSUB01_10826 Colletotrichum sublineola CSUB01_10826 N 0.000
CTRG_00655 Candida tropicalis CTRG_00655 I 0.000
DEHA2G10560g Debaryomyces hansenii DEHA2G10560g I 0.000
DRE_06964 Drechslerella stenobrocha DRE_06964 I 0.000
Ecym_2312 Eremothecium cymbalariae Ecym_2312 I 0.000
estExt_fgenesh1_pg.C_chr_6.10474 Pichia stipitis estExt_fgenesh1_pg.C_chr_6.10474 I 0.000
EURHEDRAFT_462177 Aspergillus ruber EURHEDRAFT_462177 N 0.000
F503_06440 Ophiostoma piceae uamh F503_06440 N 0.000
G210_0510 Candida maltosa G210_0510 I 0.000
G647_06910 Cladophialophora carrionii G647_06910 I 0.000
GLRG_05271 Colletotrichum graminicola GLRG_05271 N 0.000
GNLVRS01_PISO0A02134g Millerozyma farinosa GNLVRS01_PISO0A02134g N 0.000
GNLVRS01_PISO0B02289g Millerozyma farinosa GNLVRS01_PISO0B02289g N 0.000
GNLVRS01_PISO0E07748g Millerozyma farinosa GNLVRS01_PISO0E07748g I 0.000
GNLVRS01_PISO0F09091g Millerozyma farinosa GNLVRS01_PISO0F09091g I 0.000
GSTUM_00004466001 Tuber melanosporum GSTUM_00004466001 N 0.000
gw1.18.319.1 Mycosphaerella fijiensis gw1.18.319.1 N 0.000
H072_3239 Dactylellina haptotyla H072_3239 N 0.000
H101_00214 Trichophyton interdigitale H101_00214 N 0.000
HCBG_08291 Histoplasma capsulatum HCBG_08291 N 0.000
HMPREF1120_08552 Exophiala dermatitidis HMPREF1120_08552 N 0.000
HMPREF1541_00864 Cyphellophora europaea HMPREF1541_00864 N 0.000
HMPREF1624_03486 Sporothrix schenckii HMPREF1624_03486 N 0.000
HPODL_00954 Ogataea parapolymorpha HPODL_00954 I 0.000
JL09_g4519 Pichia kudriavzevii JL09_g4519 I 0.000
KLLA0_E03191g Kluyveromyces lactis KLLA0_E03191g I 0.000
KLTH0F14982g Lachancea thermotolerans KLTH0F14982g I 0.000
KLTH0F14982g Kluyveromyces thermotolerans KLTH0F14982g I 0.000
KNAG_0B04040 Kazachstania naganishii KNAG_0B04040 I 0.000
Kpol_1050p79 Vanderwaltozyma polyspora Kpol_1050p79 N 0.000
Kwal_21254 Kluyveromyces waltii Kwal_21254 I 0.000
LALA0_S01e07668g Lachancea lanzarotensis LALA0_S01e07668g I 0.000
LELG_03187 Lodderomyces elongisporus LELG_03187 N 0.000
LELG_03188 Lodderomyces elongisporus LELG_03188 N 0.000
LEMA_P023210.1 Leptosphaeria maculans LEMA_P023210.1 I 0.000
LEMA_P076740.1 Leptosphaeria maculans LEMA_P076740.1 N 0.000
M437DRAFT_56721 Aureobasidium melanogenum M437DRAFT_56721 N 0.000
M438DRAFT_272047 Aureobasidium pullulans M438DRAFT_272047 N 0.000
MAJ_01594 Metarhizium majus MAJ_01594 N 0.000
MANI_027126 Metarhizium anisopliae MANI_027126 N 0.000
MBR_04590 Metarhizium brunneum MBR_04590 N 0.000
MCYG_02334 Microsporum canis MCYG_02334 N 0.000
MGU_04157 Metarhizium guizhouense MGU_04157 N 0.000
MGYG_07335 Microsporum gypseum MGYG_07335 N 0.000
MPH_02552 Macrophomina phaseolina MPH_02552 N 0.000
MYCFIDRAFT_146678 Pseudocercospora fijiensis MYCFIDRAFT_146678 N 0.000
MYCTH_2312138 Myceliophthora thermophila MYCTH_2312138 N 0.000
NCAS_0H02280 Naumovozyma castellii NCAS_0H02280 I 0.000
NDAI_0C01380 Naumovozyma dairenensis NDAI_0C01380 I 0.000
NFIA_028860 Neosartorya fischeri CADNFIAG00002767 N 0.000
PAAG_01459 Paracoccidioides sp lutzii PAAG_01459 N 0.000
PABG_01939 Paracoccidioides brasiliensis PABG_01939 N 0.000
PAS_chr3_0115 Komagataella pastoris PAS_chr3_0115 I 0.000
PAS_chr3_1235 Komagataella pastoris PAS_chr3_1235 I 0.000
Pc13g06670 Penicillium chrysogenum Pc13g06670 N 0.000
PCH_Pc13g06670 Penicillium rubens PCH_Pc13g06670 N 0.000
PDE_05764 Penicillium oxalicum PDE_05764 N 0.000
PDIP_15740 Penicillium digitatum PDIP_15740 N 0.000
PEX1_020890 Penicillium expansum PEX1_020890 N 0.000
PFICI_09422 Pestalotiopsis fici PFICI_09422 I 0.000
PGUG_04779 Candida guilliermondii PGUG_04779 I 0.000
PGUG_04779 Meyerozyma guilliermondii PGUG_04779 I 0.000
PICST_68146 Scheffersomyces stipitis PICST_68146 I 0.000
PMAA_085950 Talaromyces marneffei PMAA_085950 N 0.000
PMAA_085950 Penicillium marneffei PMAA_085950 N 0.000
PTRG_00596 Pyrenophora triticirepentis PTRG_00596 I 0.000
PTT_16950 Pyrenophora teres PTT_16950 I 0.000
PV04_05986 Capronia semiimmersa PV04_05986 N 0.000
PV05_05603 Exophiala xenobiotica PV05_05603 N 0.000
PV06_00857 Exophiala oligosperma PV06_00857 N 0.000
PV07_04143 Cladophialophora immunda PV07_04143 N 0.000
PV08_00880 Exophiala spinifera PV08_00880 N 0.000
PV09_01119 Verruconis gallopava PV09_01119 N 0.000
PV10_07698 Exophiala mesophila PV10_07698 N 0.000
PV11_00595 Exophiala sideris PV11_00595 N 0.000
SAKL0G03586g Lachancea kluyveri SAKL0G03586g I 0.000
SBOR_3380 Sclerotinia borealis SBOR_3380 N 0.000
Scas_Contig714.29 Saccharomyces castellii Scas_Contig714.29 I 0.000
SETTUDRAFT_26712 Setosphaeria turcica SETTUDRAFT_26712 I 0.000
SFL1 Saccharomyces cerevisiae YOR140W D 0.000
SKUD_183302 Saccharomyces kudriavzevii SKUD_183302 I 0.000
SNOG_08309 Stagonospora nodorum SNOG_08309 N 0.000
SNOG_08309 Phaeosphaeria nodorum SNOG_08309 I 0.000
SNOG_09038 Phaeosphaeria nodorum SNOG_09038 I 0.000
SPPG_01116 Spizellomyces punctatus SPPG_01116 I 0.000
TDEL_0A03400 Torulaspora delbrueckii TDEL_0A03400 I 0.000
TESG_06359 Trichophyton tonsurans TESG_06359 N 0.000
THITE_2123849 Thielavia terrestris THITE_2123849 N 0.000
TRV_00290 Trichophyton verrucosum TRV_00290 N 0.000
TSTA_121070 Talaromyces stipitatus TSTA_121070 N 0.000
U727_0043017041 Penicillium solitum U727_0043017041 N 0.000
UV8b_4500 Ustilaginoidea virens UV8b_4500 N 0.000
VDAG_07492 Verticillium dahliae VDAG_07492 N 0.000
VDBG_05547 Verticillium albo atrum VDBG_05547 N 0.000
VDBG_05547 Verticillium alfalfae VDBG_05547 N 0.000
W97_04615 Coniosporium apollinis W97_04615 N 0.000
X797_007282 Metarhizium robertsii X797_007282 N 0.000
XP_002492324.1 Pichia pastoris XP_002492324.1 I 0.000
XP_002493129.1 Pichia pastoris XP_002493129.1 I 0.000
YALI0_D04785g Yarrowia lipolytica YALI0_D04785g I 0.000
Z517_00530 Fonsecaea pedrosoi Z517_00530 N 0.000
Z518_08730 Rhinocladiella mackenziei Z518_08730 N 0.000
Z519_07578 Cladophialophora bantiana Z519_07578 N 0.000
ZBAI_09477 Zygosaccharomyces bailii ZBAI_09477 I 0.000
ZYRO0D11286g Zygosaccharomyces rouxii ZYRO0D11286g I 0.000