RSKR_0000632700 (Rhabditophanes kr3021)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 RSKR_0000632700 T235850_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.827 0.821
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.816 0.821
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.786 0.839
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.786 0.839
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.786 0.839
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.778 0.804
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.778 0.804
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.778 0.804
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.778 0.804
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.778 0.804
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.778 0.804
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.777 0.786
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.777 0.786
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.777 0.786
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0000632700.1 Homeodomain 92 150

Links

Other Homeodomain family TFs
Other Rhabditophanes kr3021 TFs

381 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000013848 Ailuropoda melanoleuca ENSAMEG00000013848 I 0.000
ENSCSAG00000010921 Chlorocebus sabaeus ENSCSAG00000010921 I 0.000
ENSMICG00000015505 Microcebus murinus ENSMICG00000015505 I 0.000
ENSMMUG00000022438 Macaca mulatta ENSMMUG00000022438 I 0.000
ENSMPUG00000017296 Mustela putorius furo ENSMPUG00000017296 I 0.000
ENSNLEG00000015906 Nomascus leucogenys ENSNLEG00000015906 I 0.000
ENSOARG00000002999 Ovis aries ENSOARG00000002999 I 0.000
ENSP00000363556 Macaca fascicularis ENSP00000363556 I 0.000
ENSPANG00000022663 Papio anubis ENSPANG00000022663 I 0.000
ENSPPYG00000002216 Pongo abelii ENSPPYG00000002216 I 0.000
ENSSTOG00000023360 Ictidomys tridecemlineatus ENSSTOG00000023360 I 0.000
ENSTSYG00000001194 Tarsius syrichta ENSTSYG00000001194 I 0.000
Myotis_brandtii_ZNF32_10002123 Myotis brandtii Myotis_brandtii_ZNF32_10002123 I 0.000
Zfp637 Mus musculus ENSMUSG00000059689 D 0.000
Zfp637 Rattus norvegicus ENSRNOG00000023065 I 0.000
ZNF32 Cavia porcellus ENSCPOG00000004727 I 0.000
ZNF32 Bos taurus ENSBTAG00000016191 I 0.000
ZNF32 Canis familiaris ENSCAFG00000032307 I 0.000
ZNF32 Vicugna pacos ENSVPAG00000012401 I 0.000
ZNF32 Tursiops truncatus ENSTTRG00000014346 I 0.000
ZNF32 Choloepus hoffmanni ENSCHOG00000005545 I 0.000
ZNF32 Callithrix jacchus ENSCJAG00000016286 I 0.000
ZNF32 Sus scrofa ENSSSCG00000010416 I 0.000
ZNF32 Sorex araneus ENSSARG00000011839 I 0.000
ZNF32 Pteropus vampyrus ENSPVAG00000016235 I 0.000
ZNF32 Pan troglodytes ENSPTRG00000002448 I 0.000
ZNF32 Loxodonta africana ENSLAFG00000005025 I 0.000
ZNF32 Dasypus novemcinctus ENSDNOG00000035046 I 0.000
ZNF32 Ochotona princeps ENSOPRG00000010386 I 0.000
ZNF32 Otolemur garnettii ENSOGAG00000007013 I 0.000
ZNF32 Oryctolagus cuniculus ENSOCUG00000007509 I 0.000
ZNF32 Equus caballus ENSECAG00000023676 I 0.000
ZNF32 Erinaceus europaeus ENSEEUG00000007280 I 0.000
ZNF32 Homo sapiens ENSG00000169740 D 0.000
ZNF32 Gorilla gorilla ENSGGOG00000005425 I 0.000
ZNF32 Myotis lucifugus ENSMLUG00000006327 I 0.000