SSTP_0000077100 (Strongyloides stercoralis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SSTP_0000077100 T236467_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Optix
M02124_2.00 		Drosophila melanogaster
NNNNNDATMN
NKATHNNNNN		 PBM
Weirauch et al.(2014)
pTH5437 		0.846 0.930
Optix
M03850_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
Optix_1 		0.846 0.930
Optix
M06526_2.00 		Drosophila melanogaster
TGATA
TATCA		 B1H
Mathelier et al.(2014)
MA0199.1 		0.846 0.930
Optix
M06327_2.00 		Drosophila melanogaster
HHVTGATA
TATCABDD		 B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360 		0.846 0.930
Optix
M06328_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360 		0.846 0.930
Six3
M00483_2.00 		Mus musculus
NNNAYMN
NKRTNNN		 PBM
Berger et al.(2008)
Six3_1732 		0.846 0.912
SIX3
M05159_2.00 		Homo sapiens
NNYGATABBN
NVVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX 		0.846 0.912
SIX3
M10698_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX3_Q6 		0.846 0.912
SIX3
M05160_2.00 		Homo sapiens
NNYGATABVB
VBVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX 		0.846 0.912
SIX6
M00326_2.00 		Homo sapiens
NNDATMB
VKATHNN		 PBM
Barrera et al.(2016)
SIX6_REF 		0.845 0.895
Six6
M00169_2.00 		Mus musculus
NNAYMNN
NNKRTNN		 PBM
Badis et al.(2009)
Six6_2267 		0.845 0.895
Six6
M00412_2.00 		Mus musculus
NNNTGATAYCN
NGRTATCANNN		 PBM
Berger et al.(2008)
Six6_2267 		0.845 0.895
six3
M02102_2.00 		Oryzias latipes
NNDAYMBNNN
NNNVKRTHNN		 PBM
Weirauch et al.(2014)
pTH5928 		0.845 0.895
SIX6
M05357_2.00 		Homo sapiens
NNYGATASVB
VBSTATCRNN		 SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX 		0.845 0.895
SIX6
M00325_2.00 		Homo sapiens
NNNDATMB
VKATHNNN		 PBM
Barrera et al.(2016)
SIX6_H141N 		0.845 0.895
SIX6
M05358_2.00 		Homo sapiens
VBVYAYCRNN
NNYGRTRBVB		 SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX 		0.845 0.895
SIX6
M00327_2.00 		Homo sapiens
NHDAYMBNN
NNVKRTHDN		 PBM
Barrera et al.(2016)
SIX6_T165A 		0.839 0.877
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SSTP_0000077100.1 Homeodomain 196 252

Links

Other Homeodomain family TFs
Other Strongyloides stercoralis TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB009657 Anopheles albimanus AALB009657 I 0.000
AARA006703 Anopheles arabiensis AARA006703 I 0.000
AATE004130 Anopheles atroparvus AATE004130 I 0.000
ACAC_0001082701 Angiostrongylus cantonensis ACAC_0001082701 I 0.000
ACOC_0001282001 Angiostrongylus costaricensis ACOC_0001282001 I 0.000
ACYPI48102 Acyrthosiphon pisum ACYPI48102 I 0.000
AEPI004731 Anopheles epiroticus AEPI004731 I 0.000
AFUN005541 Anopheles funestus AFUN005541 I 0.000
AGAP002234 Anopheles gambiae AGAP002234 I 0.000
AMAM005986 Anopheles maculatus AMAM005986 I 0.000
AMEC011506 Anopheles melas AMEC011506 I 0.000
AMEM012481 Anopheles merus AMEM012481 I 0.000
AMIN000835 Anopheles minimus AMIN000835 I 0.000
AQUA004261 Anopheles quadriannulatus AQUA004261 I 0.000
ASTEI03427 Anopheles stephensi ASTEI03427 I 0.000
CBG09846 Caenorhabditis briggsae CBG09846 I 0.000
CPIJ015933 Culex quinquefasciatus CPIJ015933 I 0.000
CpipJ_CPIJ015933 Culex pipiens CpipJ_CPIJ015933 I 0.000
CRE25188 Caenorhabditis remanei CRE25188 I 0.000
e_gw.356.102.1 Branchiostoma floridae e_gw.356.102.1 I 0.000
GA10225 Drosophila pseudoobscura FBgn0070284 I 0.000
GD19868 Drosophila simulans FBgn0191357 I 0.000
GE10213 Drosophila yakuba FBgn0228087 I 0.000
GF16659 Drosophila ananassae FBgn0093680 I 0.000
GG13368 Drosophila erecta FBgn0105640 I 0.000
GH18089 Drosophila grimshawi FBgn0125557 I 0.000
GI24589 Drosophila mojavensis FBgn0147311 I 0.000
GJ22654 Drosophila virilis FBgn0209758 I 0.000
GK13826 Drosophila willistoni FBgn0215834 I 0.000
GL22067 Drosophila persimilis FBgn0159659 I 0.000
GM10889 Drosophila sechellia FBgn0165835 I 0.000
gw.353.21.1 Branchiostoma floridae gw.353.21.1 I 0.000
HelroG148423 Helobdella robusta HelroG148423 I 0.000
HPLM_0002159101 Haemonchus placei HPLM_0002159101 I 0.000
Hr83 Drosophila melanogaster FBgn0037436 D 0.000
HR83 Aedes aegypti AAEL007350 I 0.000
Hsal_03084--XP_001121181.1_APIME Harpegnathos saltator Hsal_03084--XP_001121181.1_APIME I 0.000
ISCW008659 Ixodes scapularis ISCW008659 I 0.000
L596_g19535 Steinernema carpocapsae L596_g19535 N 0.000
L798_08383 Zootermopsis nevadensis L798_08383 I 0.000
L889_g32531 Steinernema feltiae L889_g32531 I 0.000
L892_g29081 Steinernema scapterisci L892_g29081 N 0.000
LCUP007875 Lucilia cuprina LCUP007875 I 0.000
LLOJ000718 Lutzomyia longipalpis LLOJ000718 I 0.000
LotgiG132791 Lottia gigantea LotgiG132791 I 0.000
MDOA009347 Musca domestica MDOA009347 I 0.000
NV10871 Nasonia vitripennis NV10871 I 0.000
Ocbimv22005486m.g Octopus bimaculoides Ocbimv22005486m.g I 0.000
PPAI010314 Phlebotomus papatasi PPAI010314 I 0.000
Sakowv30002570m.g Saccoglossus kowalevskii Sakowv30002570m.g I 0.000
SMU15015045 Schmidtea mediterranea SMU15015045 I 0.000
SPU_012586 Strongylocentrotus purpuratus SPU_012586 I 0.000
TC010460 Tribolium castaneum TC010460 I 0.000
tetur01g07700 Tetranychus urticae tetur01g07700 I 0.000
XP_002156561.1 Hydra magnipapillata XP_002156561.1 I 0.000