hsf1 (Danio rerio)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 ENSDARG00000008818 T240178_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSF1
M03329_2.00 		Homo sapiens
GAANVTTCBVGAA
TTCBVGAABNTTC		 SELEX
Jolma et al.(2013)
HSF1_1 		0.628 0.906
HSF1
M03330_2.00 		Homo sapiens
GAANRTTCBAGAA
TTCTVGAAYNTTC		 SELEX
Jolma et al.(2013)
HSF1_2 		0.628 0.906
HSF1
M05523_2.00 		Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB		 SELEX
Yin et al.(2017)
HSF1_eDBD_HT-SELEX 		0.628 0.906
HSF1
M05525_2.00 		Homo sapiens
VGAANRTTCKVGAAN
NTTCBMGAAYNTTCB		 SELEX
Yin et al.(2017)
HSF1_FL_HT-SELEX 		0.628 0.906
HSF1
M07977_2.00 		Homo sapiens
GDCSYGGGTTCRADYCCC
GGGRHTYGAACCCRSGHC		 ChIP-seq
Gerstein et al.(2012)
HepG2_HSF1_Stanford 		0.628 0.906
HSF1
M09230_2.00 		Homo sapiens
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN		 Misc
Kulakovskiy et al.(2013)
HSF1_HUMAN.H11MO.0.A 		0.628 0.906
Hsf1
M09232_2.00 		Mus musculus
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN		 Misc
Kulakovskiy et al.(2013)
HSF1_MOUSE.H11MO.0.A 		0.628 0.906
HSF1
M09592_2.00 		Homo sapiens
NNBBCYRGAANNTTCYRGVV
BBCYRGAANNTTCYRGVVNN		 Misc
Heinz et al.(2010)
HepG2-HSF1_GSE31477 		0.628 0.906
Hsf1
M09593_2.00 		Mus musculus
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN		 Misc
Heinz et al.(2010)
Striatum-HSF1_GSE38000 		0.628 0.906
HSF1
M10863_2.00 		Homo sapiens
NGAAHNTTCY
RGAANDTTCN		 Transfac
Matys et al.(2006)
V$HSF1_01 		0.628 0.906
HSF1
M10864_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q5_01 		0.628 0.906
HSF1
M10865_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q5 		0.628 0.906
HSF1
M10866_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q6_01 		0.628 0.906
HSF1
M10867_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q6 		0.628 0.906
HSF1
M10868_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF_Q6 		0.628 0.906
HSF1
M05524_2.00 		Homo sapiens
RGAANRTTCYRGAWN
NWTCYRGAAYNTTCY		 SELEX
Yin et al.(2017)
HSF1_eDBD_Methyl-HT-SELEX 		0.628 0.906
HSF1
M05526_2.00 		Homo sapiens
RGAANVTTCYRGAWN
NWTCYRGAABNTTCY		 SELEX
Yin et al.(2017)
HSF1_FL_Methyl-HT-SELEX 		0.628 0.906
HSF4
M03325_2.00 		Homo sapiens
GAANNTTCBVGAA
TTCBVGAANNTTC		 SELEX
Jolma et al.(2013)
HSF4_1 		0.489 0.750
HSF4
M05509_2.00 		Homo sapiens
VGAABVTTCKVGAAN
NTTCBMGAABVTTCB		 SELEX
Yin et al.(2017)
HSF4_eDBD_HT-SELEX 		0.489 0.750
HSF4
M10862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF4_Q3 		0.489 0.750
HSF4
M05510_2.00 		Homo sapiens
RGAABVWDCYRGAWN
NWTCYRGHWBVTTCY		 SELEX
Yin et al.(2017)
HSF4_eDBD_Methyl-HT-SELEX 		0.489 0.750
hsf2
M02248_2.00 		Danio rerio
NNNWGTTCTATNN
NNATAGAACWNNN		 PBM
Weirauch et al.(2014)
pTH9010 		0.438 0.698
Hsf2
M09231_2.00 		Mus musculus
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_MOUSE.H11MO.0.A 		0.433 0.708
HSF2
M03324_2.00 		Homo sapiens
GAANVTTCTAGAA
TTCTAGAABNTTC		 SELEX
Jolma et al.(2013)
HSF2_1 		0.426 0.698
HSF2
M02744_2.00 		Homo sapiens
GAABGTTCTRGA
TCYAGAACVTTC		 SELEX
Jolma et al.(2010)
HSF2_dimertrimer 		0.426 0.698
HSF2
M05505_2.00 		Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB		 SELEX
Yin et al.(2017)
HSF2_eDBD_HT-SELEX 		0.426 0.698
HSF2
M05507_2.00 		Homo sapiens
VGAANNTTCBVGAAN
NTTCBVGAANNTTCB		 SELEX
Yin et al.(2017)
HSF2_FL_HT-SELEX 		0.426 0.698
HSF2
M09229_2.00 		Homo sapiens
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_HUMAN.H11MO.0.A 		0.426 0.698
HSF2
M10859_2.00 		Homo sapiens
VGAANNWTCB
VGAWNNTTCB		 Transfac
Matys et al.(2006)
V$HSF2_01 		0.426 0.698
HSF2
M10860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_02 		0.426 0.698
HSF2
M10861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_Q6 		0.426 0.698
HSF2
M05506_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_eDBD_Methyl-HT-SELEX 		0.426 0.698
HSF2
M05508_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_FL_Methyl-HT-SELEX 		0.426 0.698
Hsf
M03908_2.00 		Drosophila melanogaster
BVGAANRTTCTVGAANN
NNTTCBAGAAYNTTCBV		 SELEX
Nitta et al.(2015)
Hsf_1 		0.353 0.542
Hsf
M03909_2.00 		Drosophila melanogaster
NVGAAYNTTCBAGAANN
NNTTCTVGAANRTTCBN		 SELEX
Nitta et al.(2015)
Hsf_2 		0.353 0.542
Hsf
M03910_2.00 		Drosophila melanogaster
NVGAAYNTTCTVGAANN
NNTTCBAGAANRTTCBN		 SELEX
Nitta et al.(2015)
Hsf_3 		0.353 0.542
Hsf
M03911_2.00 		Drosophila melanogaster
NVGAANRTTCBAGAANN
NNTTCTVGAAYNTTCBN		 SELEX
Nitta et al.(2015)
Hsf_4 		0.353 0.542
Hsf
M06388_2.00 		Drosophila melanogaster
KMGAADNTTCKMGA
TCKMGAANHTTCKM		 B1H
Zhu et al.(2011)
Hsf_FlyReg_FBgn0001222 		0.353 0.542
Hsf
M10869_2.00 		Drosophila melanogaster
HTTCK
MGAAD		 Transfac
Matys et al.(2006)
I$HSF_01 		0.353 0.542
Hsf
M10870_2.00 		Drosophila melanogaster
MGAADMGAADMGAAD
HTTCKHTTCKHTTCK		 Transfac
Matys et al.(2006)
I$HSF_02 		0.353 0.542
Hsf
M10871_2.00 		Drosophila melanogaster
MGAADHTTCKHTTCK
MGAADMGAADHTTCK		 Transfac
Matys et al.(2006)
I$HSF_03 		0.353 0.542
Hsf
M10872_2.00 		Drosophila melanogaster
MGAADHTTCKMGAAD
HTTCKMGAADHTTCK		 Transfac
Matys et al.(2006)
I$HSF_04 		0.353 0.542
Hsf
M10873_2.00 		Drosophila melanogaster
HTTCKHTTCKMGAAD
HTTCKMGAADMGAAD		 Transfac
Matys et al.(2006)
I$HSF_05 		0.353 0.542
hsf-1
M02249_2.00 		Neurospora crassa
NNNTTCBDNN
NNHVGAANNN		 PBM
Weirauch et al.(2014)
pTH8857 		0.330 0.448
ANIA_08035
M02247_2.00 		Aspergillus nidulans
NNNNTTCYRN
NYRGAANNNN		 PBM
Weirauch et al.(2014)
pTH8231 		0.328 0.448
HSFB2A
M00869_2.00 		Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN		 PBM
Franco-Zorrilla et al.(2014)
HSFB2A 		0.328 0.500
HSFB2A
M06952_2.00 		Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF6_col_a 		0.328 0.500
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000005404 HSF 21 122
ENSDARP00000076789 HSF 21 122
ENSDARP00000104813 HSF 21 122
ENSDARP00000111250 HSF 21 122
ENSDARP00000121268 HSF 21 122

Links

Other HSF family TFs
Other Danio rerio TFs

623 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29742.m001447 Ricinus communis 29742.m001447 N 0.000
Al_scaffold_0136_3 Arabidopsis lyrata Al_scaffold_0136_3 N 0.000
Bo3g022870 Brassica oleracea Bo3g022870 N 0.000
Bo3g039260 Brassica oleracea Bo3g039260 N 0.000
Bo4g009260 Brassica oleracea Bo4g009260 N 0.000
Bo4g197120 Brassica oleracea Bo4g197120 N 0.000
Bo9g110930 Brassica oleracea Bo9g110930 N 0.000
Bostr.25993s0128 Boechera stricta Bostr.25993s0128 N 0.000
Bostr.26833s0960 Boechera stricta Bostr.26833s0960 N 0.000
Bostr.7365s0058 Boechera stricta Bostr.7365s0058 N 0.000
Bra004539 Brassica rapa Bra004539 N 0.000
Bra026297 Brassica rapa Bra026297 N 0.000
Bra039283 Brassica rapa Bra039283 N 0.000
Cagra.0050s0058 Capsella grandiflora Cagra.0050s0058 N 0.000
Cagra.0084s0067 Capsella grandiflora Cagra.0084s0067 N 0.000
Cagra.0567s0009 Capsella grandiflora Cagra.0567s0009 N 0.000
Cagra.1372s0017 Capsella grandiflora Cagra.1372s0017 N 0.000
Carubv10003403m.g Capsella rubella Carubv10003403m.g N 0.000
Carubv10024406m.g Capsella rubella Carubv10024406m.g N 0.000
Carubv10024964m.g Capsella rubella Carubv10024964m.g N 0.000
Carubv10027412m.g Capsella rubella Carubv10027412m.g N 0.000
cassava32987.m1 Manihot esculenta cassava32987.m1 N 0.000
cassava46504.m1 Manihot esculenta cassava46504.m1 N 0.000
Ca_15029 Cicer arietinum Ca_15029 N 0.000
Ciclev10006315m.g Citrus clementina Ciclev10006315m.g N 0.000
Ciclev10024111m.g Citrus clementina Ciclev10024111m.g N 0.000
Cla011563 Citrullus lanatus Cla011563 N 0.000
CPC Arabidopsis thaliana AT2G46410 N 0.000
Eucgr.D02360 Eucalyptus grandis Eucgr.D02360 N 0.000
Eucgr.E00069 Eucalyptus grandis Eucgr.E00069 N 0.000
evm.TU.contig_29502 Carica papaya evm.TU.contig_29502 N 0.000
evm.TU.supercontig_3.55 Carica papaya evm.TU.supercontig_3.55 N 0.000
gene19217-v1.0-hybrid Fragaria vesca gene19217-v1.0-hybrid N 0.000
GLYMA01G43435 Glycine max GLYMA01G43435 N 0.000
GLYMA11G02061 Glycine max GLYMA11G02061 N 0.000
Gorai.001G155700 Gossypium raimondii Gorai.001G155700 N 0.000
Gorai.007G107400 Gossypium raimondii Gorai.007G107400 N 0.000
GSMUA_Achr8G19880_001 Musa acuminata GSMUA_Achr8G19880_001 N 0.000
GSMUA_AchrUn_randomG19730_001 Musa acuminata GSMUA_AchrUn_randomG19730_001 N 0.000
Lus10005949.g Linum usitatissimum Lus10005949.g N 0.000
Lus10038822.g Linum usitatissimum Lus10038822.g N 0.000
MDP0000141474 Malus domestica MDP0000141474 N 0.000
MDP0000583070 Malus domestica MDP0000583070 N 0.000
MDP0000718806 Malus domestica MDP0000718806 N 0.000
MTR_5g009460 Medicago truncatula MTR_5g009460 N 0.000
orange1.1g034546m.g Citrus sinensis orange1.1g034546m.g N 0.000
PGSC0003DMG400000212 Solanum tuberosum PGSC0003DMG400000212 N 0.000
Pm018400 Prunus mume Pm018400 N 0.000
POPTR_0002s17030 Populus trichocarpa POPTR_0002s17030 N 0.000
POPTR_0012s01420 Populus trichocarpa POPTR_0012s01420 N 0.000
POPTR_0014s09200 Populus trichocarpa POPTR_0014s09200 N 0.000
PRUPE_ppa023853mg Prunus persica PRUPE_ppa023853mg N 0.000
SapurV1A.0013s0580 Salix purpurea SapurV1A.0013s0580 N 0.000
SapurV1A.0190s0070 Salix purpurea SapurV1A.0190s0070 N 0.000
SapurV1A.0346s0010 Salix purpurea SapurV1A.0346s0010 N 0.000
SapurV1A.0377s0050 Salix purpurea SapurV1A.0377s0050 N 0.000
SapurV1A.1227s0050 Salix purpurea SapurV1A.1227s0050 N 0.000
SapurV1A.2295s0020 Salix purpurea SapurV1A.2295s0020 N 0.000
SapurV1A.2893s0010 Salix purpurea SapurV1A.2893s0010 N 0.000
Solyc01g095640.1 Solanum lycopersicum Solyc01g095640.1 N 0.000
TCM_005177 Theobroma cacao TCM_005177 N 0.000
TCM_016428 Theobroma cacao TCM_016428 N 0.000
Thhalv10001695m.g Eutrema salsugineum Thhalv10001695m.g N 0.000
Thhalv10015741m.g Eutrema salsugineum Thhalv10015741m.g N 0.000
TRY Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001350 N 0.000
TRY Arabidopsis thaliana AT5G53200 N 0.000
VIT_15s0046g01130 Vitis vinifera VIT_15s0046g01130 N 0.000
VIT_16s0050g02530 Vitis vinifera VIT_16s0050g02530 N 0.000