Pvit_08961 (Pogona vitticeps)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 Pvit_08961 T242657_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSF2
M03324_2.00 		Homo sapiens
GAANVTTCTAGAA
TTCTAGAABNTTC		 SELEX
Jolma et al.(2013)
HSF2_1 		0.383 0.902
HSF2
M02744_2.00 		Homo sapiens
GAABGTTCTRGA
TCYAGAACVTTC		 SELEX
Jolma et al.(2010)
HSF2_dimertrimer 		0.383 0.902
HSF2
M05505_2.00 		Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB		 SELEX
Yin et al.(2017)
HSF2_eDBD_HT-SELEX 		0.383 0.902
HSF2
M05507_2.00 		Homo sapiens
VGAANNTTCBVGAAN
NTTCBVGAANNTTCB		 SELEX
Yin et al.(2017)
HSF2_FL_HT-SELEX 		0.383 0.902
HSF2
M09229_2.00 		Homo sapiens
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_HUMAN.H11MO.0.A 		0.383 0.902
HSF2
M10859_2.00 		Homo sapiens
VGAANNWTCB
VGAWNNTTCB		 Transfac
Matys et al.(2006)
V$HSF2_01 		0.383 0.902
HSF2
M10860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_02 		0.383 0.902
HSF2
M10861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_Q6 		0.383 0.902
HSF2
M05506_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_eDBD_Methyl-HT-SELEX 		0.383 0.902
HSF2
M05508_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_FL_Methyl-HT-SELEX 		0.383 0.902
Hsf2
M09231_2.00 		Mus musculus
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_MOUSE.H11MO.0.A 		0.374 0.863
hsf2
M02248_2.00 		Danio rerio
NNNWGTTCTATNN
NNATAGAACWNNN		 PBM
Weirauch et al.(2014)
pTH9010 		0.367 0.863
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_08961 HSF 1 54

Links

Other HSF family TFs
Other Pogona vitticeps TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA021487 Oryza indica BGIOSGA021487 N 0.000
BRADI2G52860 Brachypodium distachyon BRADI2G52860 I 0.000
F775_14171 Aegilops tauschii F775_14171 I 0.000
Gorai.013G004400 Gossypium raimondii Gorai.013G004400 I 0.000
GRMZM2G019907 Zea mays GRMZM2G019907 I 0.000
GRMZM2G125243 Zea mays GRMZM2G125243 I 0.000
mgf003015m Mimulus guttatus mgf003015m I 0.000
mgf016587m Mimulus guttatus mgf016587m N 0.000
OB01G43330 Oryza brachyantha OB01G43330 I 0.000
OB06G19370 Oryza brachyantha OB06G19370 N 0.000
OBART06G10160 Oryza barthii OBART06G10160 N 0.000
OGLUM06G11040 Oryza glumaepatula OGLUM06G11040 N 0.000
OMERI06G11830 Oryza meridionalis OMERI06G11830 N 0.000
ONIVA06G11770 Oryza nivara ONIVA06G11770 N 0.000
OPUNC06G09770 Oryza punctata OPUNC06G09770 N 0.000
ORGLA06G0095900 Oryza glaberrima ORGLA06G0095900 N 0.000
ORUFI06G10660 Oryza rufipogon ORUFI06G10660 N 0.000
Pavir.Ea01074 Panicum virgatum Pavir.Ea01074 I 0.000
Pavir.Eb03507 Panicum virgatum Pavir.Eb03507 I 0.000
Sb03g037560 Sorghum bicolor Sb03g037560 I 0.000
Si001292m.g Setaria italica Si001292m.g I 0.000
TGAL3 Oryza sativa OS06G0265400 N 0.000
TRAES3BF027700210CFD_g Triticum aestivum TRAES3BF027700210CFD_g I 0.000
Traes_3AL_5490CF370 Triticum aestivum Traes_3AL_5490CF370 I 0.000
Traes_3DL_A71427183 Triticum aestivum Traes_3DL_A71427183 I 0.000
TRIUR3_09546 Triticum urartu TRIUR3_09546 I 0.000