Tal_R003171 (Tyto alba)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 Tal_R003171 T242664_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSF2
M03324_2.00 		Homo sapiens
GAANVTTCTAGAA
TTCTAGAABNTTC		 SELEX
Jolma et al.(2013)
HSF2_1 		0.492 0.922
HSF2
M02744_2.00 		Homo sapiens
GAABGTTCTRGA
TCYAGAACVTTC		 SELEX
Jolma et al.(2010)
HSF2_dimertrimer 		0.492 0.922
HSF2
M05505_2.00 		Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB		 SELEX
Yin et al.(2017)
HSF2_eDBD_HT-SELEX 		0.492 0.922
HSF2
M05507_2.00 		Homo sapiens
VGAANNTTCBVGAAN
NTTCBVGAANNTTCB		 SELEX
Yin et al.(2017)
HSF2_FL_HT-SELEX 		0.492 0.922
HSF2
M09229_2.00 		Homo sapiens
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_HUMAN.H11MO.0.A 		0.492 0.922
HSF2
M10859_2.00 		Homo sapiens
VGAANNWTCB
VGAWNNTTCB		 Transfac
Matys et al.(2006)
V$HSF2_01 		0.492 0.922
HSF2
M10860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_02 		0.492 0.922
HSF2
M10861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_Q6 		0.492 0.922
HSF2
M05506_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_eDBD_Methyl-HT-SELEX 		0.492 0.922
HSF2
M05508_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_FL_Methyl-HT-SELEX 		0.492 0.922
Hsf2
M09231_2.00 		Mus musculus
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_MOUSE.H11MO.0.A 		0.483 0.896
hsf2
M02248_2.00 		Danio rerio
NNNWGTTCTATNN
NNATAGAACWNNN		 PBM
Weirauch et al.(2014)
pTH9010 		0.474 0.857
ANIA_08035
M02247_2.00 		Aspergillus nidulans
NNNNTTCYRN
NYRGAANNNN		 PBM
Weirauch et al.(2014)
pTH8231 		0.343 0.532
hsf-1
M02249_2.00 		Neurospora crassa
NNNTTCBDNN
NNHVGAANNN		 PBM
Weirauch et al.(2014)
pTH8857 		0.332 0.506
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Tal_R003171 HSF 1 80

Links

Other HSF family TFs
Other Tyto alba TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA001192 Oryza indica BGIOSGA001192 N 0.000
BGIOSGA001193 Oryza indica BGIOSGA001193 N 0.000
Bo9g003750 Brassica oleracea Bo9g003750 N 0.000
Bra037388 Brassica rapa Bra037388 N 0.000
GRMZM2G057955 Zea mays GRMZM2G057955 N 0.000
LPERR01G19720 Leersia perrieri LPERR01G19720 N 0.000
MLOC_68772 Hordeum vulgare MLOC_68772 N 0.000
OB01G32460 Oryza brachyantha OB01G32460 N 0.000
OB01G32480 Oryza brachyantha OB01G32480 N 0.000
OBART01G22950 Oryza barthii OBART01G22950 N 0.000
OBART01G22980 Oryza barthii OBART01G22980 N 0.000
OGLUM01G26700 Oryza glumaepatula OGLUM01G26700 N 0.000
OGLUM01G26760 Oryza glumaepatula OGLUM01G26760 N 0.000
OLONG_010128 Oryza longistaminata OLONG_010128 N 0.000
OMERI01G21040 Oryza meridionalis OMERI01G21040 N 0.000
OPUNC01G23150 Oryza punctata OPUNC01G23150 N 0.000
ORGLA01G0184700 Oryza glaberrima ORGLA01G0184700 N 0.000
ORUFI01G25760 Oryza rufipogon ORUFI01G25760 N 0.000
ORUFI01G25800 Oryza rufipogon ORUFI01G25800 N 0.000
Pavir.Eb02165 Panicum virgatum Pavir.Eb02165 N 0.000
Pavir.J30777 Panicum virgatum Pavir.J30777 N 0.000
PK15950.1 Cannabis sativa PK15950.1 N 0.000
Sb03g028170 Sorghum bicolor Sb03g028170 N 0.000
TRAES3BF020200120CFD_g Triticum aestivum TRAES3BF020200120CFD_g N 0.000
Traes_3DL_30CF35BB3 Triticum aestivum Traes_3DL_30CF35BB3 N 0.000
TRIUR3_10842 Triticum urartu TRIUR3_10842 N 0.000