Eucgr.E02813 (Eucalyptus grandis)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 Eucgr.E02813 T243119_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.524 0.839
HSFA1E
M06939_2.00 		Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_col_a 		0.485 0.759
HSFA1E
M06940_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a 		0.485 0.759
HSFA1B
M06948_2.00 		Arabidopsis thaliana
GAANNTTCTAGA
TCTAGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF3_col_a 		0.459 0.736
HSFA1B
M06949_2.00 		Arabidopsis thaliana
TTCYRG
CYRGAA		 Dap-seq
OMalley et al.(2016)
HSF3_colamp_a 		0.459 0.736
HSFB4
M06936_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFB4_col_a 		0.454 0.724
HSFB2B
M06945_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_col_a 		0.428 0.655
HSFB2B
M06946_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_colamp_a 		0.428 0.655
HSFB2A
M00869_2.00 		Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN		 PBM
Franco-Zorrilla et al.(2014)
HSFB2A 		0.424 0.632
HSFB2A
M06952_2.00 		Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF6_col_a 		0.424 0.632
HSFA6B
M06941_2.00 		Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a 		0.421 0.655
HSFA6B
M06942_2.00 		Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_col 		0.421 0.655
HSFB3
M06937_2.00 		Arabidopsis thaliana
RRAANMWTCTAGAAV
BTTCTAGAWKNTTYY		 Dap-seq
OMalley et al.(2016)
HSFB3_col_a 		0.414 0.632
HSFB3
M06938_2.00 		Arabidopsis thaliana
AABSTTCTAGAAN
NTTCTAGAASVTT		 Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a 		0.414 0.632
HSFA6A
M06950_2.00 		Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_col_a 		0.407 0.632
HSFA6A
M06951_2.00 		Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a 		0.407 0.632
HSFC1
M00868_2.00 		Arabidopsis thaliana
NDTCBNNN
NNNVGAHN		 PBM
Franco-Zorrilla et al.(2014)
HSFC1 		0.399 0.621
HSFC1
M06943_2.00 		Arabidopsis thaliana
GAASNTTCTAG
CTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFC1_col_a 		0.399 0.621
HSFC1
M06944_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAANVW
WBNTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a 		0.399 0.621
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.E02813.1 HSF 14 104

Links

Other HSF family TFs
Other Eucalyptus grandis TFs

1511 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29736.m002013 Ricinus communis 29736.m002013 I
AMTR_s00010p00252990 Amborella trichopoda AMTR_s00010p00252990 I
Aquca_002_00543 Aquilegia coerulea Aquca_002_00543 I
BGIOSGA026188 Oryza indica BGIOSGA026188 I
Bo2g136560 Brassica oleracea Bo2g136560 I
Bo5g019500 Brassica oleracea Bo5g019500 I
Bo7g080730 Brassica oleracea Bo7g080730 I
Bostr.0556s0099 Boechera stricta Bostr.0556s0099 I
Bostr.13671s0016 Boechera stricta Bostr.13671s0016 I
Bra019658 Brassica rapa Bra019658 I
Bra024804 Brassica rapa Bra024804 I
Cagra.0534s0022 Capsella grandiflora Cagra.0534s0022 I
Cagra.3501s0066 Capsella grandiflora Cagra.3501s0066 I
Carubv10011707m.g Capsella rubella Carubv10011707m.g I
Carubv10017119m.g Capsella rubella Carubv10017119m.g I
cassava35260.valid.m1 Manihot esculenta cassava35260.valid.m1 I
cassava39089.m1 Manihot esculenta cassava39089.m1 I
Ca_18779 Cicer arietinum Ca_18779 I
Ciclev10031405m.g Citrus clementina Ciclev10031405m.g I
Cla010333 Citrullus lanatus Cla010333 I
Cucsa.285270 Cucumis sativus Cucsa.285270 I
Eucgr.B03417 Eucalyptus grandis Eucgr.B03417 I
Eucgr.G02522 Eucalyptus grandis Eucgr.G02522 I
evm.TU.supercontig_183.27 Carica papaya evm.TU.supercontig_183.27 I
FLP Arabidopsis lyrata fgenesh2_kg.1__1561__AT1G14350.1 I
GLYMA01G05190 Glycine max GLYMA01G05190 I
GLYMA02G02310 Glycine max GLYMA02G02310 I
GLYMA08G40950 Glycine max GLYMA08G40950 I
GLYMA18G16040 Glycine max GLYMA18G16040 I
Gorai.005G139500 Gossypium raimondii Gorai.005G139500 I
Gorai.013G083300 Gossypium raimondii Gorai.013G083300 I
GRMZM2G064630 Zea mays GRMZM2G064630 I
GSMUA_Achr10G18880_001 Musa acuminata GSMUA_Achr10G18880_001 I
Lus10012847.g Linum usitatissimum Lus10012847.g I
Lus10030494.g Linum usitatissimum Lus10030494.g I
MDP0000165523 Malus domestica MDP0000165523 I
MDP0000210970 Malus domestica MDP0000210970 I
MTR_5g038910 Medicago truncatula MTR_5g038910 I
MTR_8g468380 Medicago truncatula MTR_8g468380 I
MYB124 Arabidopsis thaliana AT1G14350 D
MYB88 Arabidopsis thaliana AT2G02820 D
MYB88 Arabidopsis lyrata fgenesh2_kg.5__181__AT2G02820.2 I
OB07G28520 Oryza brachyantha OB07G28520 I
OBART07G22930 Oryza barthii OBART07G22930 I
OGLUM07G22980 Oryza glumaepatula OGLUM07G22980 I
OPUNC07G21540 Oryza punctata OPUNC07G21540 I
orange1.1g044977m.g Citrus sinensis orange1.1g044977m.g I
ORGLA07G0179200 Oryza glaberrima ORGLA07G0179200 I
ORUFI07G24080 Oryza rufipogon ORUFI07G24080 I
OS07G0627300 Oryza sativa OS07G0627300 I
Pavir.Bb03405 Panicum virgatum Pavir.Bb03405 I
Pavir.J36475 Panicum virgatum Pavir.J36475 I
PDK_20s1473891g001 Phoenix dactylifera PDK_20s1473891g001 I
PGSC0003DMG400002828 Solanum tuberosum PGSC0003DMG400002828 I
PGSC0003DMG400025612 Solanum tuberosum PGSC0003DMG400025612 I
PGSC0003DMG400026758 Solanum tuberosum PGSC0003DMG400026758 I
PK05123.1 Cannabis sativa PK05123.1 I
Pm006532 Prunus mume Pm006532 I
POPTR_0008s14790 Populus trichocarpa POPTR_0008s14790 I
POPTR_0010s10310 Populus trichocarpa POPTR_0010s10310 I
PRUPE_ppa017536mg Prunus persica PRUPE_ppa017536mg I
SapurV1A.0062s0030 Salix purpurea SapurV1A.0062s0030 I
SapurV1A.0200s0020 Salix purpurea SapurV1A.0200s0020 I
Sb02g040050 Sorghum bicolor Sb02g040050 I
Si029124m.g Setaria italica Si029124m.g I
Solyc04g005710.1 Solanum lycopersicum Solyc04g005710.1 I
Solyc05g007160.2 Solanum lycopersicum Solyc05g007160.2 I
TCM_011776 Theobroma cacao TCM_011776 I
Thhalv10004109m.g Eutrema salsugineum Thhalv10004109m.g I
Thhalv10007659m.g Eutrema salsugineum Thhalv10007659m.g I
Traes_2AS_1161E1D2E Triticum aestivum Traes_2AS_1161E1D2E I
Traes_2BS_F1B450FA4 Triticum aestivum Traes_2BS_F1B450FA4 I
Traes_2DS_9430AAD52 Triticum aestivum Traes_2DS_9430AAD52 I
VIT_01s0026g01910 Vitis vinifera VIT_01s0026g01910 I