irf5 (Gasterosteus aculeatus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSGACG00000000695 T244086_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF6
M02254_2.00 		Meleagris gallopavo
NRNCGAWACY
RGTWTCGNYN		 PBM
Weirauch et al.(2014)
pTH9210 		0.781 0.781
irf5.L
M02260_2.00 		Xenopus laevis
VNCGADACHN
NDGTHTCGNB		 PBM
Weirauch et al.(2014)
pTH9367 		0.781 0.781
IRF6
M02253_2.00 		Gallus gallus
NNMCNAAWNN
NNWTTNGKNN		 PBM
Weirauch et al.(2014)
pTH9178 		0.771 0.771
irf6.2
M02259_2.00 		Xenopus tropicalis
NVNHGAWACH
DGTWTCDNBN		 PBM
Weirauch et al.(2014)
pTH9302 		0.762 0.762
Irf6
M00176_2.00 		Mus musculus
NNNHGADASN
NSTHTCDNNN		 PBM
Badis et al.(2009)
Irf6_3803 		0.752 0.752
IRF6
M05527_2.00 		Homo sapiens
RGTWTCGNNNNNNYGAWACY
RGTWTCRNNNNNNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_HT-SELEX 		0.752 0.752
IRF6
M05529_2.00 		Homo sapiens
ACCGAAACT
AGTTTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_HT-SELEX 		0.752 0.752
IRF6
M05528_2.00 		Homo sapiens
RGTWTCGNHNNDNYGAWACY
RGTWTCRNHNNDNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_Methyl-HT-SELEX 		0.752 0.752
IRF6
M05530_2.00 		Homo sapiens
ACCGAWACY
RGTWTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_Methyl-HT-SELEX 		0.752 0.752
Irf5
M00177_2.00 		Mus musculus
NNNHGADASH
DSTHTCDNNN		 PBM
Badis et al.(2009)
Irf5_3874 		0.743 0.743
IRF5
M02256_2.00 		Oryctolagus cuniculus
NHCGAAACYN
NRGTTTCGDN		 PBM
Weirauch et al.(2014)
pTH9272 		0.733 0.733
IRF5
M03332_2.00 		Homo sapiens
YCGAAACCGAAMCY
RGKTTCGGTTTCGR		 SELEX
Jolma et al.(2013)
IRF5_1 		0.733 0.733
IRF5
M03333_2.00 		Homo sapiens
HACCGAAACYV
BRGTTTCGGTD		 SELEX
Jolma et al.(2013)
IRF5_2 		0.733 0.733
IRF5
M05535_2.00 		Homo sapiens
NCGAAACCGAWACH
DGTWTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_eDBD_HT-SELEX 		0.733 0.733
IRF5
M05537_2.00 		Homo sapiens
NCGAAACCGAAACY
RGTTTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_FL_HT-SELEX 		0.733 0.733
IRF5
M10884_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF5_Q3 		0.733 0.733
IRF5
M05536_2.00 		Homo sapiens
NYGAWACYGAWACH
DGTWTCRGTWTCRN		 SELEX
Yin et al.(2017)
IRF5_eDBD_Methyl-HT-SELEX 		0.733 0.733
IRF5
M05538_2.00 		Homo sapiens
NYGAAACCGAWACY
RGTWTCGGTTTCRN		 SELEX
Yin et al.(2017)
IRF5_FL_Methyl-HT-SELEX 		0.733 0.733
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000000899 IRF 10 115
ENSGACP00000000900 IRF 9 114
ENSGACP00000000903 IRF 13 118

Links

Other IRF family TFs
Other Gasterosteus aculeatus TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10015207 Chelonia mydas Cmyd_10015207 N
ENSAMEG00000009571 Ailuropoda melanoleuca ENSAMEG00000009571 N
ENSCSAG00000013961 Chlorocebus sabaeus ENSCSAG00000013961 N
ENSFALG00000005566 Ficedula albicollis ENSFALG00000005566 N
ENSGALG00000027603 Gallus gallus ENSGALG00000027603 N
ENSMPUG00000017699 Mustela putorius furo ENSMPUG00000017699 N
ENSNLEG00000006488 Nomascus leucogenys ENSNLEG00000006488 N
ENSP00000380144-D1 Bos grunniens ENSP00000380144-D1 N
ENSPANG00000023855 Papio anubis ENSPANG00000023855 N
ENSPPYG00000011012 Pongo abelii ENSPPYG00000011012 N
ENSSTOG00000011674 Ictidomys tridecemlineatus ENSSTOG00000011674 N
Myotis_brandtii_ZHX3_10025211 Myotis brandtii Myotis_brandtii_ZHX3_10025211 N
ZHX3 Monodelphis domestica ENSMODG00000000636 N
ZHX3 Pan troglodytes ENSPTRG00000013501 N
Zhx3 Rattus norvegicus ENSRNOG00000027988 N
ZHX3 Ochotona princeps ENSOPRG00000014931 N
ZHX3 Otolemur garnettii ENSOGAG00000013363 N
ZHX3 Oryctolagus cuniculus ENSOCUG00000006439 N
ZHX3 Ornithorhynchus anatinus ENSOANG00000014351 N
ZHX3 Tursiops truncatus ENSTTRG00000002687 N
Zhx3 Mus musculus ENSMUSG00000035877 N
ZHX3 Macaca mulatta ENSMMUG00000005904 N
ZHX3 Myotis lucifugus ENSMLUG00000010226 N
ZHX3 Loxodonta africana ENSLAFG00000022196 N
ZHX3 Gorilla gorilla ENSGGOG00000008691 N
ZHX3 Homo sapiens ENSG00000174306 N
ZHX3 Felis catus ENSFCAG00000009034 N
Zhx3 Dipodomys ordii ENSDORG00000012139 N
ZHX3 Dasypus novemcinctus ENSDNOG00000005387 N
ZHX3 Cavia porcellus ENSCPOG00000002738 N
ZHX3 Callithrix jacchus ENSCJAG00000018012 N
ZHX3 Choloepus hoffmanni ENSCHOG00000009000 N
ZHX3 Canis familiaris ENSCAFG00000009101 N
ZHX3 Bos taurus ENSBTAG00000017594 N