ENSGMOG00000007988 (Gadus morhua)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSGMOG00000007988 T244121_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF6
M02254_2.00 		Meleagris gallopavo
NRNCGAWACY
RGTWTCGNYN		 PBM
Weirauch et al.(2014)
pTH9210 		0.867 0.867
IRF6
M02253_2.00 		Gallus gallus
NNMCNAAWNN
NNWTTNGKNN		 PBM
Weirauch et al.(2014)
pTH9178 		0.857 0.857
Irf6
M00176_2.00 		Mus musculus
NNNHGADASN
NSTHTCDNNN		 PBM
Badis et al.(2009)
Irf6_3803 		0.857 0.857
IRF6
M05527_2.00 		Homo sapiens
RGTWTCGNNNNNNYGAWACY
RGTWTCRNNNNNNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_HT-SELEX 		0.857 0.857
IRF6
M05529_2.00 		Homo sapiens
ACCGAAACT
AGTTTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_HT-SELEX 		0.857 0.857
IRF6
M05528_2.00 		Homo sapiens
RGTWTCGNHNNDNYGAWACY
RGTWTCRNHNNDNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_Methyl-HT-SELEX 		0.857 0.857
IRF6
M05530_2.00 		Homo sapiens
ACCGAWACY
RGTWTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_Methyl-HT-SELEX 		0.857 0.857
irf6.2
M02259_2.00 		Xenopus tropicalis
NVNHGAWACH
DGTWTCDNBN		 PBM
Weirauch et al.(2014)
pTH9302 		0.838 0.838
irf5.L
M02260_2.00 		Xenopus laevis
VNCGADACHN
NDGTHTCGNB		 PBM
Weirauch et al.(2014)
pTH9367 		0.781 0.781
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGMOP00000008545 IRF 9 114

Links

Other IRF family TFs
Other Gadus morhua TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R001981 Aptenodytes forsteri Afo_R001981 I 0.867
Alligator_sinensis_CCG003696.1 Alligator sinensis Alligator_sinensis_CCG003696.1 I 0.867
Alligator_sinensis_CCG004564.1 Alligator sinensis Alligator_sinensis_CCG004564.1 I 0.743
Alligator_sinensis_CCG015719.1 Alligator sinensis Alligator_sinensis_CCG015719.1 I 0.857
Cmyd_10002838 Chelonia mydas Cmyd_10002838 I 0.705
Cmyd_10010684 Chelonia mydas Cmyd_10010684 I 0.848
ENSAMEG00000005109 Ailuropoda melanoleuca ENSAMEG00000005109 I
ENSAPLG00000006203 Anas platyrhynchos ENSAPLG00000006203 I 0.705
ENSAPLG00000009319 Anas platyrhynchos ENSAPLG00000009319 I 0.867
ENSCSAG00000009970 Chlorocebus sabaeus ENSCSAG00000009970 I
ENSGMOG00000007264 Gadus morhua ENSGMOG00000007264 I 0.762
ENSLACG00000005750 Latimeria chalumnae ENSLACG00000005750 I 0.743
ENSLACG00000018600 Latimeria chalumnae ENSLACG00000018600 I 0.867
ENSLOCG00000015563 Lepisosteus oculatus ENSLOCG00000015563 I 0.733
ENSMEUG00000002435 Macropus eugenii ENSMEUG00000002435 I
ENSMEUG00000014941 Macropus eugenii ENSMEUG00000014941 I 0.848
ENSMPUG00000006034 Mustela putorius furo ENSMPUG00000006034 I
ENSNLEG00000012454 Nomascus leucogenys ENSNLEG00000012454 I
ENSOARG00000003908 Ovis aries ENSOARG00000003908 I
ENSONIG00000007600 Oreochromis niloticus ENSONIG00000007600 I 0.781
ENSP00000349770 Macaca fascicularis ENSP00000349770 I
ENSP00000349770-D1 Bos grunniens ENSP00000349770-D1 I
ENSPANG00000018384 Papio anubis ENSPANG00000018384 I
ENSPFOG00000013528 Poecilia formosa ENSPFOG00000013528 I 0.781
ENSPSIG00000003597 Pelodiscus sinensis ENSPSIG00000003597 I 0.857
ENSSHAG00000006683 Sarcophilus harrisii ENSSHAG00000006683 I 0.705
ENSSTOG00000004858 Ictidomys tridecemlineatus ENSSTOG00000004858 I
ENSXMAG00000013056 Xiphophorus maculatus ENSXMAG00000013056 I 0.781
IRF5 Pteropus vampyrus ENSPVAG00000015756 I
IRF5 Pan troglodytes ENSPTRG00000019675 I
Irf5 Rattus norvegicus ENSRNOG00000007437 I
Irf5 Mus musculus ENSMUSG00000029771 D
irf5 Takifugu rubripes ENSTRUG00000000641 I 0.781
irf5 Tetraodon nigroviridis ENSTNIG00000003346 I 0.781
IRF5 Canis familiaris ENSCAFG00000001611 I
IRF5 Ochotona princeps ENSOPRG00000006148 I
IRF5 Sus scrofa ENSSSCG00000016573 I
IRF5 Bos taurus ENSBTAG00000004989 I
IRF5 Oryctolagus cuniculus ENSOCUG00000010101 D
irf5 Danio rerio ENSDARG00000045681 I 0.733
IRF5 Dasypus novemcinctus ENSDNOG00000013370 I
Irf5 Dipodomys ordii ENSDORG00000010627 I
IRF5 Equus caballus ENSECAG00000009902 I
IRF5 Felis catus ENSFCAG00000000956 I
IRF5 Homo sapiens ENSG00000128604 D
irf5 Gasterosteus aculeatus ENSGACG00000000695 I 0.743
irf5 Xenopus tropicalis XB-GENE-998624 I 0.762
IRF5 Gorilla gorilla ENSGGOG00000012013 I
IRF5 Loxodonta africana ENSLAFG00000021568 I
IRF5 Microcebus murinus ENSMICG00000000138 I
IRF5 Myotis lucifugus ENSMLUG00000001406 I
IRF5 Macaca mulatta ENSMMUG00000018478 I
IRF5 Monodelphis domestica ENSMODG00000014710 I
IRF5 Cavia porcellus ENSCPOG00000000246 I
IRF5 Ornithorhynchus anatinus ENSOANG00000011449 I
IRF5 Callithrix jacchus ENSCJAG00000018061 I
IRF5 Otolemur garnettii ENSOGAG00000009608 I
irf5.L Xenopus laevis XB-GENE-998629 D 0.781
IRF6 Taeniopygia guttata ENSTGUG00000001485 I 0.867
IRF6 Sus scrofa ENSSSCG00000015612 I 0.857
IRF6 Ornithorhynchus anatinus ENSOANG00000013718 I 0.848
IRF6 Monodelphis domestica ENSMODG00000002539 I 0.848
IRF6 Meleagris gallopavo ENSMGAG00000004431 D 0.867
IRF6 Gallus gallus ENSGALG00000001405 D 0.857
IRF6 Anolis carolinensis ENSACAG00000005931 I 0.867
irf6.2 Xenopus tropicalis XB-GENE-5910331 D 0.838
irf6.2.L Xenopus laevis XB-GENE-5910427 I 0.838
irf6.S Xenopus laevis XB-GENE-876421 I 0.838
Myotis_brandtii_IRF5_10012830 Myotis brandtii Myotis_brandtii_IRF5_10012830 I
Pvit_14327 Pogona vitticeps Pvit_14327 I 0.743
Pvit_15428 Pogona vitticeps Pvit_15428 I 0.838