gene30747-v1.0-hybrid (Fragaria vesca)
Leafy

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01698 (FLO_LFY) IPR002910 gene30747-v1.0-hybrid T244787_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LFY
M02692_2.00 		Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR		 SELEX
Mathelier et al.(2014)
MA0590.1 		0.738 0.738
LFY
M10895_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$LFY_Q2 		0.738 0.738
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna30747.1-v1.0-hybrid Leafy 1 226

Links

Other Leafy family TFs
Other Fragaria vesca TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30147.m014401 Ricinus communis 30147.m014401 I 0.744
Bo2g161690 Brassica oleracea Bo2g161690 I 0.726
Bo3g109270 Brassica oleracea Bo3g109270 I 0.744
Bostr.26833s0050 Boechera stricta Bostr.26833s0050 I 0.726
Bra019619 Brassica rapa Bra019619 I 0.726
Bra029305 Brassica rapa Bra029305 I 0.726
Cagra.4553s0022 Capsella grandiflora Cagra.4553s0022 I 0.714
Carubv10028602m.g Capsella rubella Carubv10028602m.g I 0.714
cassava19992.m1 Manihot esculenta cassava19992.m1 I 0.720
cassava40548.m1 Manihot esculenta cassava40548.m1 I 0.744
Ca_01386 Cicer arietinum Ca_01386 I 0.744
chr1.CM0094.750.nd Lotus japonicus chr1.CM0094.750.nd I 0.738
Ciclev10033942m.g Citrus clementina Ciclev10033942m.g I 0.726
Cla019619 Citrullus lanatus Cla019619 I 0.714
Cucsa.156880 Cucumis sativus Cucsa.156880 I 0.726
FL Populus trichocarpa POPTR_0015s11820 I 0.726
gene30683-v1.0-hybrid Fragaria vesca gene30683-v1.0-hybrid I 0.823
gene30750-v1.0-hybrid Fragaria vesca gene30750-v1.0-hybrid I 0.963
gene33406-v1.0-hybrid Fragaria vesca gene33406-v1.0-hybrid I 0.827
GLYMA06G17170 Glycine max GLYMA06G17170 I 0.756
Gorai.001G053900 Gossypium raimondii Gorai.001G053900 I 0.756
LFY Arabidopsis thaliana AT5G61850 D 0.720
LFY Arabidopsis lyrata Al_scaffold_0008_2690 I 0.714
LFY Vitis vinifera VIT_17s0000g00150 I 0.726
Lus10016732.g Linum usitatissimum Lus10016732.g I 0.726
Lus10022427.g Linum usitatissimum Lus10022427.g I 0.750
mgf013601m Mimulus guttatus mgf013601m I 0.756
mgf020579m Mimulus guttatus mgf020579m I 0.738
MTR_3g098560 Medicago truncatula MTR_3g098560 I 0.750
orange1.1g044766m.g Citrus sinensis orange1.1g044766m.g I 0.726
PRUPE_ppa006372mg Prunus persica PRUPE_ppa006372mg I 0.720
SapurV1A.2394s0010 Salix purpurea SapurV1A.2394s0010 I 0.726
Solyc03g118160.1 Solanum lycopersicum Solyc03g118160.1 I 0.738
TCM_014768 Theobroma cacao TCM_014768 I 0.750
Thhalv10005606m.g Eutrema salsugineum Thhalv10005606m.g I 0.732