Traes_1DL_1290B6A52 (Triticum aestivum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 Traes_1DL_1290B6A52 T246156_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD6
M06955_2.00 		Arabidopsis thaliana
CGSCGGNDDHDRCGGMGRHDN
NHDYCKCCGYHDHHNCCGSCG		 Dap-seq
OMalley et al.(2016)
AS2_col_a 		0.892 0.892
LOB
M06966_2.00 		Arabidopsis thaliana
NVCGGCGGHRRHDRMGGMGGH
DCCKCCKYHDYYDCCGCCGBN		 Dap-seq
OMalley et al.(2016)
LOB_col_a 		0.769 0.769
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_1DL_1290B6A52.1 LOB 1 65

Links

Other LOB family TFs
Other Triticum aestivum TFs

213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CY34DRAFT_65016 Suillus luteus CY34DRAFT_65016 N
DICSQDRAFT_25834 Dichomitus squalens DICSQDRAFT_25834 N
fgenesh1_pg.C_scaffold_7000290 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_7000290 N
FIBRA_00221 Fibroporia radiculosa FIBRA_00221 N
FOMPIDRAFT_1106900 Fomitopsis pinicola FOMPIDRAFT_1106900 N
GLOTRDRAFT_11198 Gloeophyllum trabeum GLOTRDRAFT_11198 N
GLOTRDRAFT_132317 Gloeophyllum trabeum GLOTRDRAFT_132317 N
gw1.12.560.1 Heterobasidion annosum gw1.12.560.1 N
HETIRDRAFT_163823 Heterobasidion irregulare HETIRDRAFT_163823 N
HYDPIDRAFT_72317 Hydnomerulius pinastri HYDPIDRAFT_72317 N
JAAARDRAFT_128575 Jaapia argillacea JAAARDRAFT_128575 N
M422DRAFT_138730 Sphaerobolus stellatus M422DRAFT_138730 N
PHACADRAFT_251994 Phanerochaete carnosa PHACADRAFT_251994 N
PHLGIDRAFT_425290 Phlebiopsis gigantea PHLGIDRAFT_425290 N
PILCRDRAFT_810920 Piloderma croceum PILCRDRAFT_810920 N
PISMIDRAFT_95946 Pisolithus microcarpus PISMIDRAFT_95946 N
SERLA73DRAFT_149914 Serpula lacrymans SERLA73DRAFT_149914 N