CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.10.155.1
(
Physcomitrella patens
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
gw1.10.155.1
T246548_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.10.155.1
LOB
7
105
ACAACKYQRRKCSPDCPLSPYFPPDQPKRFQNVHKLFGVSNILRILKHVDPSKREDTVKSIIYEADTREKDPVHGCLGVTTILQNQVSKLKDELAVARE
Links
Other
LOB
family TFs
Other
Physcomitrella patens
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh1_pg.C_110148
Phytophthora capsici
estExt_fgenesh1_pg.C_110148
N
F443_17630
Phytophthora parasitica
F443_17630
N
fgenesh_scip_prom.28083.6999
Phytophthora lateralis
fgenesh_scip_prom.28083.6999
N
HpaG807837
Hyaloperonospora arabidopsidis
HpaG807837
N
maker-pir_contig_233-fgenesh-gene-0.3
Pythium irregulare
maker-pir_contig_233-fgenesh-gene-0.3
N
maker-piw_contig_55-fgenesh-gene-0.12
Pythium iwayamai
maker-piw_contig_55-fgenesh-gene-0.12
N
Phyra84970
Phytophthora ramorum
Phyra84970
N
Physo129327
Phytophthora sojae
Physo129327
N
PITG_12304
Phytophthora infestans
PITG_12304
N
PYU1_G010143
Pythium ultimum
PYU1_G010143
N