Ciclev10021399m.g (Citrus clementina)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Ciclev10021399m.g T246808_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10021399m LOB 10 109

Links

Other LOB family TFs
Other Citrus clementina TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30147.m014053 Ricinus communis 30147.m014053 N 0.808
cassava19740.m1 Manihot esculenta cassava19740.m1 N 0.848
cassava35156.m1 Manihot esculenta cassava35156.m1 N 0.788
Ca_15323 Cicer arietinum Ca_15323 N 0.707
Ciclev10029958m.g Citrus clementina Ciclev10029958m.g N 0.737
evm.TU.supercontig_17.185 Carica papaya evm.TU.supercontig_17.185 N 0.788
Gorai.003G070700 Gossypium raimondii Gorai.003G070700 N 0.717
Gorai.007G034800 Gossypium raimondii Gorai.007G034800 N 0.717
GSMUA_Achr5G15570_001 Musa acuminata GSMUA_Achr5G15570_001 N 0.738
MDP0000153290 Malus domestica MDP0000153290 N 0.758
MDP0000216231 Malus domestica MDP0000216231 N 0.788
MTR_4g107450 Medicago truncatula MTR_4g107450 N 0.707
orange1.1g042591m.g Citrus sinensis orange1.1g042591m.g N 0.737
Pm024623 Prunus mume Pm024623 N 0.768
POPTR_0012s07390 Populus trichocarpa POPTR_0012s07390 N 0.758
POPTR_0015s07780 Populus trichocarpa POPTR_0015s07780 N 0.768
PRUPE_ppa025223mg Prunus persica PRUPE_ppa025223mg N 0.768
SapurV1A.0138s0160 Salix purpurea SapurV1A.0138s0160 N 0.768
SapurV1A.0161s0030 Salix purpurea SapurV1A.0161s0030 N 0.798
SCP Vitis vinifera VIT_17s0000g05490 N 0.707
TCM_030184 Theobroma cacao TCM_030184 N 0.717