Thhalv10011007m.g (Eutrema salsugineum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Thhalv10011007m.g T247342_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10011007m LOB 38 136

Links

Other LOB family TFs
Other Eutrema salsugineum TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00026p00244220 Amborella trichopoda AMTR_s00026p00244220 I
ASIM_0001141701 Anisakis simplex ASIM_0001141701 I
BGIOSGA010071 Oryza indica BGIOSGA010071 I
BGIOSGA010073 Oryza indica BGIOSGA010073 I
Bo1g072490 Brassica oleracea Bo1g072490 N 0.889
Bo3g135950 Brassica oleracea Bo3g135950 N 0.939
Bostr.10273s0307 Boechera stricta Bostr.10273s0307 I
Bostr.18473s0162 Boechera stricta Bostr.18473s0162 N 0.859
Bra018102 Brassica rapa Bra018102 N 0.939
BRADI1G12690 Brachypodium distachyon BRADI1G12690 I
Cagra.13768s0012 Capsella grandiflora Cagra.13768s0012 N 0.929
Carubv10018376m.g Capsella rubella Carubv10018376m.g N 0.929
cassava15025.m1 Manihot esculenta cassava15025.m1 I
cassava41616.m1 Manihot esculenta cassava41616.m1 I
Ca_10289 Cicer arietinum Ca_10289 I
CC1G_02962 Coprinopsis cinerea CC1G_02962 I
chr2.CM0826.10.nc Lotus japonicus chr2.CM0826.10.nc I
Cla000831 Citrullus lanatus Cla000831 I
Cla015874 Citrullus lanatus Cla015874 I
Cucsa.148830 Cucumis sativus Cucsa.148830 I
Cucsa.394390 Cucumis sativus Cucsa.394390 I
ENSEEUG00000012324 Erinaceus europaeus ENSEEUG00000012324 I
ENSLOCG00000014306 Lepisosteus oculatus ENSLOCG00000014306 I
ENSOCUG00000027741 Oryctolagus cuniculus ENSOCUG00000027741 I
ENSTSYG00000013512 Tarsius syrichta ENSTSYG00000013512 I
Eucgr.H03292 Eucalyptus grandis Eucgr.H03292 I
evm.TU.supercontig_17.185 Carica papaya evm.TU.supercontig_17.185 N 0.717
evm.TU.supercontig_254.5 Carica papaya evm.TU.supercontig_254.5 I
gene02647-v1.0-hybrid Fragaria vesca gene02647-v1.0-hybrid I
gene31590-v1.0-hybrid Fragaria vesca gene31590-v1.0-hybrid I
GLYMA02G43761 Glycine max GLYMA02G43761 I
GLYMA03G39041 Glycine max GLYMA03G39041 I
GLYMA04G05210 Glycine max GLYMA04G05210 I
GLYMA14G05150 Glycine max GLYMA14G05150 I
Gorai.004G236400 Gossypium raimondii Gorai.004G236400 I
Gorai.007G306500 Gossypium raimondii Gorai.007G306500 I
Gorai.008G296800 Gossypium raimondii Gorai.008G296800 I
Gorai.013G129400 Gossypium raimondii Gorai.013G129400 I
GRMZM2G002225 Zea mays GRMZM2G002225 I
GRMZM2G061101 Zea mays GRMZM2G061101 I
GSMUA_Achr11G05110_001 Musa acuminata GSMUA_Achr11G05110_001 I
GSMUA_Achr2G00410_001 Musa acuminata GSMUA_Achr2G00410_001 I
GSMUA_Achr8G10550_001 Musa acuminata GSMUA_Achr8G10550_001 I
gw1.16.163.1 Naegleria gruberi gw1.16.163.1 I
LjSGA_061861.1 Lotus japonicus LjSGA_061861.1 I
LPERR03G24120 Leersia perrieri LPERR03G24120 I
Lus10001238.g Linum usitatissimum Lus10001238.g I
Lus10042102.g Linum usitatissimum Lus10042102.g I
MDP0000131500 Malus domestica MDP0000131500 I
MDP0000187050 Malus domestica MDP0000187050 I
MDP0000222097 Malus domestica MDP0000222097 I
MDP0000244941 Malus domestica MDP0000244941 I
MDP0000285490 Malus domestica MDP0000285490 I
MDP0000599531 Malus domestica MDP0000599531 I
MDP0000722139 Malus domestica MDP0000722139 I
MhA1_Contig274.frz3.gene11 Meloidogyne hapla MhA1_Contig274.frz3.gene11 I
MTR_5g085860 Medicago truncatula MTR_5g085860 I
NCAS_0D03570 Naumovozyma castellii NCAS_0D03570 I
nRc.2.0.1.g39805 Romanomermis culicivorax nRc.2.0.1.g39805 I
OB03G36580 Oryza brachyantha OB03G36580 I
OB03G36610 Oryza brachyantha OB03G36610 I
OBART03G29150 Oryza barthii OBART03G29150 I
OBART03G29180 Oryza barthii OBART03G29180 I
OBART03G35680 Oryza barthii OBART03G35680 I
OBART03G35710 Oryza barthii OBART03G35710 I
OGLUM03G29380 Oryza glumaepatula OGLUM03G29380 I
OGLUM03G29400 Oryza glumaepatula OGLUM03G29400 I
OGLUM03G35430 Oryza glumaepatula OGLUM03G35430 I
OLONG_002511 Oryza longistaminata OLONG_002511 I
OLONG_011116 Oryza longistaminata OLONG_011116 I
OLONG_016371 Oryza longistaminata OLONG_016371 I
OMERI03G25440 Oryza meridionalis OMERI03G25440 I
OMERI03G25470 Oryza meridionalis OMERI03G25470 I
OMERI03G32870 Oryza meridionalis OMERI03G32870 I
ONIVA03G30380 Oryza nivara ONIVA03G30380 I
OPUNC03G26650 Oryza punctata OPUNC03G26650 I
OPUNC03G26670 Oryza punctata OPUNC03G26670 I
OPUNC03G32700 Oryza punctata OPUNC03G32700 I
ORGLA03G0270500 Oryza glaberrima ORGLA03G0270500 I
ORGLA03G0327100 Oryza glaberrima ORGLA03G0327100 I
ORUFI03G30300 Oryza rufipogon ORUFI03G30300 I
ORUFI03G30320 Oryza rufipogon ORUFI03G30320 I
ORUFI03G37080 Oryza rufipogon ORUFI03G37080 I
OS03G0673500 Oryza sativa OS03G0673500 I
OS03G0771500 Oryza sativa OS03G0771500 I
Pavir.Ia01001 Panicum virgatum Pavir.Ia01001 I
Pavir.Ib04240 Panicum virgatum Pavir.Ib04240 I
PDK_20s1306711g002 Phoenix dactylifera PDK_20s1306711g002 I
PDK_20s1378761g001 Phoenix dactylifera PDK_20s1378761g001 I
PGSC0003DMG400004953 Solanum tuberosum PGSC0003DMG400004953 I
PGSC0003DMG400037011 Solanum tuberosum PGSC0003DMG400037011 I
Pm003159 Prunus mume Pm003159 I
Pm005456 Prunus mume Pm005456 I
POPTR_0005s01720 Populus trichocarpa POPTR_0005s01720 I
POPTR_0013s01000 Populus trichocarpa POPTR_0013s01000 I
PRUPE_ppa006938mg Prunus persica PRUPE_ppa006938mg I
PRUPE_ppa008432mg Prunus persica PRUPE_ppa008432mg I
PTSG_05049 Salpingoeca rosetta PTSG_05049 I
Q5EVH4_OIKDI Oikopleura dioica Q5EVH4_OIKDI D
SapurV1A.0088s0320 Salix purpurea SapurV1A.0088s0320 I
SapurV1A.0606s0090 Salix purpurea SapurV1A.0606s0090 I
SapurV1A.1157s0010 Salix purpurea SapurV1A.1157s0010 I
Sb01g012200 Sorghum bicolor Sb01g012200 I
SCP Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001275 N 0.919
Si036580m.g Setaria italica Si036580m.g I
SMU15027772 Schmidtea mediterranea SMU15027772 I
Solyc04g077210.2 Solanum lycopersicum Solyc04g077210.2 I
SPRG_07668 Saprolegnia parasitica SPRG_07668 I
Traes_4AL_6E51971E7 Triticum aestivum Traes_4AL_6E51971E7 I
Traes_4BS_1DACC49DE Triticum aestivum Traes_4BS_1DACC49DE I
Traes_4DS_66942ADD7 Triticum aestivum Traes_4DS_66942ADD7 I
Traes_4DS_F05E51AD8 Triticum aestivum Traes_4DS_F05E51AD8 I
UHOR_00760 Ustilago hordei UHOR_00760 I
UM00489 Ustilago maydis UM00489 I
unc-62 Caenorhabditis elegans WBGene00006796 D