Bo2g152980 (Brassica oleracea)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 Bo2g152980 T247979_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK15172.1
M01263_2.00 		Cannabis sativa
NNNGTWAHWN
NWDTWACNNN		 PBM
Lambert et al.(2019)
pTH10125 		0.843 0.657
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo2g152980.1 MADF 480 549

Links

Other MADF family TFs
Other Brassica oleracea TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30128.m008610 Ricinus communis 30128.m008610 I 0.880
Bo7g093250 Brassica oleracea Bo7g093250 I 0.968
Bostr.29827s0012 Boechera stricta Bostr.29827s0012 I 0.968
Bra009994 Brassica rapa Bra009994 N 0.961
Eucgr.D02541 Eucalyptus grandis Eucgr.D02541 I 0.846
LjSGA_134698.1 Lotus japonicus LjSGA_134698.1 I 0.905
PK15172.1 Cannabis sativa PK15172.1 D 0.843