GA13983 (Drosophila pseudoobscura)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 FBgn0074015 T248511_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Adf1
M03912_2.00 		Drosophila melanogaster
GCAGCGCWGY
RCWGCGCTGC		 SELEX
Nitta et al.(2015)
Adf1_1 		0.971 1.000
Adf1
M06389_2.00 		Drosophila melanogaster
CGRCYGCR
YGCRGYCG		 B1H
Zhu et al.(2011)
Adf1_FlyReg_FBgn0000054 		0.971 1.000
Adf1
M06390_2.00 		Drosophila melanogaster
YMVMRGCAGAGMHVM
KBDKCTCTGCYKBKR		 B1H
Zhu et al.(2011)
Adf1_SANGER_5_FBgn0000054 		0.971 1.000
Adf1
M10898_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$ADF1_Q6_01 		0.971 1.000
Adf1
M10899_2.00 		Drosophila melanogaster
BMGCBGYYGYNGCVBV
BVBGCNRCRRCVGCKV		 Transfac
Matys et al.(2006)
I$ADF1_Q6 		0.971 1.000
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0277282 MADF 16 90

Links

Other MADF family TFs
Other Drosophila pseudoobscura TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29703.m001536 Ricinus communis 29703.m001536 N
AMTR_s00025p00060270 Amborella trichopoda AMTR_s00025p00060270 N
Aquca_026_00063 Aquilegia coerulea Aquca_026_00063 N
Bo9g006180 Brassica oleracea Bo9g006180 N
Bostr.2983s0143 Boechera stricta Bostr.2983s0143 N
Bra036228 Brassica rapa Bra036228 N
Cagra.2552s0028 Capsella grandiflora Cagra.2552s0028 N
Carubv10003638m.g Capsella rubella Carubv10003638m.g N
cassava29542.valid.m1 Manihot esculenta cassava29542.valid.m1 N
Ca_25867 Cicer arietinum Ca_25867 N
Ciclev10019732m.g Citrus clementina Ciclev10019732m.g N
Cla005647 Citrullus lanatus Cla005647 N
Cucsa.033690 Cucumis sativus Cucsa.033690 N
Eucgr.A01358 Eucalyptus grandis Eucgr.A01358 N
fgenesh2_kg.6__3397__AT4G02990.1 Arabidopsis lyrata fgenesh2_kg.6__3397__AT4G02990.1 N
GLYMA02G38800 Glycine max GLYMA02G38800 N
Gorai.004G084100 Gossypium raimondii Gorai.004G084100 N
Lus10014877.g Linum usitatissimum Lus10014877.g N
mgf007983m Mimulus guttatus mgf007983m N
mgf009605m Mimulus guttatus mgf009605m N
MTERF4 Arabidopsis thaliana AT4G02990 N
MTR_5g068860 Medicago truncatula MTR_5g068860 N
orange1.1g010066m.g Citrus sinensis orange1.1g010066m.g N
PGSC0003DMG400002856 Solanum tuberosum PGSC0003DMG400002856 N
PK15839.1 Cannabis sativa PK15839.1 N
Pm019894 Prunus mume Pm019894 N
POPTR_0014s13360 Populus trichocarpa POPTR_0014s13360 N
PRUPE_ppa004198mg Prunus persica PRUPE_ppa004198mg N
SapurV1A.0053s0470 Salix purpurea SapurV1A.0053s0470 N
Solyc04g005630.2 Solanum lycopersicum Solyc04g005630.2 N
TCM_004475 Theobroma cacao TCM_004475 N
Thhalv10028570m.g Eutrema salsugineum Thhalv10028570m.g N
VIT_07s0104g00720 Vitis vinifera VIT_07s0104g00720 N