LPERR04G16420 (Leersia perrieri)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 LPERR04G16420 T249357_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.908 0.793
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.908 0.793
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR04G16420.1 MADF 107 178
LPERR04G16420.1 MADF 510 578

Links

Other MADF family TFs
Other Leersia perrieri TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA019849 Oryza indica BGIOSGA019849 N
BRADI2G25830 Brachypodium distachyon BRADI2G25830 N
GRMZM2G029933 Zea mays GRMZM2G029933 N
MLOC_21457 Hordeum vulgare MLOC_21457 N
OB05G23840 Oryza brachyantha OB05G23840 N
OBART05G15900 Oryza barthii OBART05G15900 N
OGLUM05G16820 Oryza glumaepatula OGLUM05G16820 N
OLONG_006623 Oryza longistaminata OLONG_006623 N
ONIVA05G16510 Oryza nivara ONIVA05G16510 N
OPUNC05G14080 Oryza punctata OPUNC05G14080 N
ORGLA05G0138100 Oryza glaberrima ORGLA05G0138100 N
ORUFI05G17050 Oryza rufipogon ORUFI05G17050 N
OS05G0404000 Oryza sativa OS05G0404000 N
Pavir.J03675 Panicum virgatum Pavir.J03675 N
Pavir.J39419 Panicum virgatum Pavir.J39419 N
Sb09g019800 Sorghum bicolor Sb09g019800 N
Si021844m.g Setaria italica Si021844m.g N
TRIUR3_11739 Triticum urartu TRIUR3_11739 N