CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.19424s0179
(
Boechera stricta
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
Bostr.19424s0179
T250587_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.19424s0179.1.p
MADF
106
182
VWGDRFLQLGRRSLRNEDWNEVAEKVSEELRMEKSEAQCRRMIDNLKRKYRKEKIKVEKSGLGSSSKWAFFNKLDML
Links
Other
MADF
family TFs
Other
Boechera stricta
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT3G24490
Arabidopsis thaliana
AT3G24490
N
0.968
Bo3g083280
Brassica oleracea
Bo3g083280
N
0.943
Bra001951
Brassica rapa
Bra001951
N
0.942
Ciclev10008866m.g
Citrus clementina
Ciclev10008866m.g
N
0.885
evm.TU.supercontig_23.117
Carica papaya
evm.TU.supercontig_23.117
N
0.841
gene02091-v1.0-hybrid
Fragaria vesca
gene02091-v1.0-hybrid
N
0.842
orange1.1g019823m.g
Citrus sinensis
orange1.1g019823m.g
N
0.885
PGSC0003DMG400027438
Solanum tuberosum
PGSC0003DMG400027438
N
0.814
Pm027397
Prunus mume
Pm027397
N
0.852
scaffold_302996.1
Arabidopsis lyrata
scaffold_302996.1
N
0.970
Solyc05g018350.2
Solanum lycopersicum
Solyc05g018350.2
N
0.814
TCM_037914
Theobroma cacao
TCM_037914
N
0.886
Thhalv10002883m.g
Eutrema salsugineum
Thhalv10002883m.g
N
0.963