MDP0000156139 (Malus domestica)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 MDP0000156139 T250756_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.875 0.701
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.875 0.701
AT1G76880
M06970_2.00 		Arabidopsis thaliana
RHRGTAAAAWNDDDWW
WWHHHNWTTTTACYDY		 Dap-seq
OMalley et al.(2016)
AT1G76880_col_a 		0.836 0.723
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000156139 MADF 178 247
MDP0000156139 MADF 575 648

Links

Other MADF family TFs
Other Malus domestica TFs

196 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCJAG00000000037 Callithrix jacchus ENSCJAG00000000037 I
ENSCSAG00000001625 Chlorocebus sabaeus ENSCSAG00000001625 I
ENSMPUG00000006246 Mustela putorius furo ENSMPUG00000006246 I
ENSNLEG00000010985 Nomascus leucogenys ENSNLEG00000010985 I
ENSP00000379464 Macaca fascicularis ENSP00000379464 I
Myotis_brandtii_ZNF134_10001928 Myotis brandtii Myotis_brandtii_ZNF134_10001928 I
ZNF134 Bos taurus ENSBTAG00000038240 I
ZNF134 Canis familiaris ENSCAFG00000031283 I
ZNF134 Felis catus ENSFCAG00000030721 I
ZNF134 Homo sapiens ENSG00000213762 D
ZNF134 Gorilla gorilla ENSGGOG00000002668 I
ZNF134 Oryctolagus cuniculus ENSOCUG00000029572 I
ZNF134 Otolemur garnettii ENSOGAG00000029871 I
ZNF134 Sus scrofa ENSSSCG00000003984 I
ZNF134 Tursiops truncatus ENSTTRG00000004316 I
ZNF211 Macaca mulatta ENSMMUG00000005333 I