Bra029469 (Brassica rapa)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Bra029469 T253344_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.896 0.896
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra029469.1-P MADS box 10 58

Links

Other MADS box family TFs
Other Brassica rapa TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP19328 Atta cephalotes ACEP19328 N
ACYPI30946 Acyrthosiphon pisum ACYPI30946 N
BGIBMGA013643 Bombyx mori BGIBMGA013643 N
GB40209 Apis mellifera GB40209 N
HMEL017405 Heliconius melpomene HMEL017405 N
Hsal_12813--XP_001121247.1_APIME Harpegnathos saltator Hsal_12813--XP_001121247.1_APIME N
KGM_02592 Danaus plexippus KGM_02592 N
NV17418 Nasonia vitripennis NV17418 N
PHUM332980 Pediculus humanus PHUM332980 N
RPRC011014 Rhodnius prolixus RPRC011014 N
SINV22426 Solenopsis invicta SINV22426 N