Bostr.10040s0123 (Boechera stricta)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Bostr.10040s0123 T257559_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL55
M06983_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
AGL55_col_a 		0.792 0.792
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.10040s0123.1.p MADS box 12 64

Links

Other MADS box family TFs
Other Boechera stricta TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R015359 Calypte anna Aan_R015359 I
Afo_R001755 Aptenodytes forsteri Afo_R001755 I
Alligator_sinensis_CCG020374.1 Alligator sinensis Alligator_sinensis_CCG020374.1 I
Brh_R010228 Buceros rhinoceros Brh_R010228 I
CAJ80803 Xenopus laevis CAJ80803 I
CGI_10012022 Crassostrea gigas CGI_10012022 I
Cmyd_10011319 Chelonia mydas Cmyd_10011319 I
ENSACAG00000016280 Anolis carolinensis ENSACAG00000016280 I
ENSAMXG00000014504 Astyanax mexicanus ENSAMXG00000014504 I
ENSAMXG00000021239 Astyanax mexicanus ENSAMXG00000021239 I
ENSAPLG00000007971 Anas platyrhynchos ENSAPLG00000007971 I
ENSBTAG00000013213 Bos taurus ENSBTAG00000013213 I
ENSBTAP00000010670-D1 Bos grunniens ENSBTAP00000010670-D1 I
ENSBTAP00000017584-D1 Bos grunniens ENSBTAP00000017584-D1 I
ENSCING00000006616 Ciona intestinalis ENSCING00000006616 I
ENSCPOG00000020572 Cavia porcellus ENSCPOG00000020572 I
ENSCSAG00000008012 Chlorocebus sabaeus ENSCSAG00000008012 I
ENSCSAG00000012312 Chlorocebus sabaeus ENSCSAG00000012312 I
ENSFALG00000001785 Ficedula albicollis ENSFALG00000001785 I
ENSFCAG00000014220 Felis catus ENSFCAG00000014220 I
ENSGMOG00000016368 Gadus morhua ENSGMOG00000016368 I
ENSLACG00000005856 Latimeria chalumnae ENSLACG00000005856 I
ENSLAFG00000009420 Loxodonta africana ENSLAFG00000009420 I
ENSLOCG00000009790 Lepisosteus oculatus ENSLOCG00000009790 I
ENSLOCG00000017185 Lepisosteus oculatus ENSLOCG00000017185 I
ENSMEUG00000016111 Macropus eugenii ENSMEUG00000016111 I
ENSMLUG00000013412 Myotis lucifugus ENSMLUG00000013412 I
ENSMPUG00000013697 Mustela putorius furo ENSMPUG00000013697 I
ENSMPUG00000015246 Mustela putorius furo ENSMPUG00000015246 I
ENSNLEG00000002004 Nomascus leucogenys ENSNLEG00000002004 I
ENSOARG00000016880 Ovis aries ENSOARG00000016880 I
ENSOCUG00000022383 Oryctolagus cuniculus ENSOCUG00000022383 I
ENSONIG00000011343 Oreochromis niloticus ENSONIG00000011343 I
ENSP00000272223 Macaca fascicularis ENSP00000272223 I
ENSPANG00000012764 Papio anubis ENSPANG00000012764 I
ENSPANG00000025998 Papio anubis ENSPANG00000025998 I
ENSPFOG00000006861 Poecilia formosa ENSPFOG00000006861 I
ENSPFOG00000012273 Poecilia formosa ENSPFOG00000012273 I
ENSPMAG00000001278 Petromyzon marinus ENSPMAG00000001278 I
ENSPPYG00000012624 Pongo abelii ENSPPYG00000012624 I
ENSPSIG00000011751 Pelodiscus sinensis ENSPSIG00000011751 I
ENSPSIG00000011787 Pelodiscus sinensis ENSPSIG00000011787 I
ENSSHAG00000007793 Sarcophilus harrisii ENSSHAG00000007793 I
ENSSHAG00000010395 Sarcophilus harrisii ENSSHAG00000010395 I
ENSSSCG00000027549 Sus scrofa ENSSSCG00000027549 I
ENSSTOG00000015454 Ictidomys tridecemlineatus ENSSTOG00000015454 I
ENSSTOG00000021263 Ictidomys tridecemlineatus ENSSTOG00000021263 I
ENSTGUG00000012027 Taeniopygia guttata ENSTGUG00000012027 I
ENSXMAG00000002498 Xiphophorus maculatus ENSXMAG00000002498 I
ENSXMAG00000015661 Xiphophorus maculatus ENSXMAG00000015661 I
Gfo_R006005 Geospiza fortis Gfo_R006005 I
Gfo_R015235 Geospiza fortis Gfo_R015235 I
LotgiG102775 Lottia gigantea LotgiG102775 I
LotgiG130661 Lottia gigantea LotgiG130661 I
Myotis_brandtii_OSR1_10031301 Myotis brandtii Myotis_brandtii_OSR1_10031301 I
Ogr01515 Ophisaurus gracilis Ogr01515 I
Ogr10172 Ophisaurus gracilis Ogr10172 I
OSR1 Anolis carolinensis ENSACAG00000007059 I
OSR1 Bos taurus ENSBTAG00000008113 I
OSR1 Canis familiaris ENSCAFG00000003775 I
OSR1 Callithrix jacchus ENSCJAG00000007379 I
OSR1 Cavia porcellus ENSCPOG00000002025 I
osr1 Danio rerio ENSDARG00000014091 I
OSR1 Dasypus novemcinctus ENSDNOG00000001304 I
Osr1 Dipodomys ordii ENSDORG00000000798 I
OSR1 Equus caballus ENSECAG00000013593 I
OSR1 Erinaceus europaeus ENSEEUG00000015377 I
OSR1 Echinops telfairi ENSETEG00000013563 I
OSR1 Felis catus ENSFCAG00000026754 I
OSR1 Homo sapiens ENSG00000143867 D
osr1 Gasterosteus aculeatus ENSGACG00000020147 I
OSR1 Gallus gallus ENSGALG00000016473 I
OSR1 Gorilla gorilla ENSGGOG00000016877 I
OSR1 Loxodonta africana ENSLAFG00000027174 I
OSR1 Meleagris gallopavo ENSMGAG00000014033 I
OSR1 Microcebus murinus ENSMICG00000004493 I
OSR1 Myotis lucifugus ENSMLUG00000011374 I
OSR1 Monodelphis domestica ENSMODG00000010584 I
Osr1 Mus musculus ENSMUSG00000048387 D
OSR1 Oryctolagus cuniculus ENSOCUG00000006091 I
OSR1 Otolemur garnettii ENSOGAG00000003047 I
osr1 Oryzias latipes ENSORLG00000010734 I
OSR1 Procavia capensis ENSPCAG00000008261 I
OSR1 Pan troglodytes ENSPTRG00000011683 I
OSR1 Pteropus vampyrus ENSPVAG00000009615 I
Osr1 Rattus norvegicus ENSRNOG00000004210 I
OSR1 Tupaia belangeri ENSTBEG00000004954 I
osr1 Tetraodon nigroviridis ENSTNIG00000018677 I
osr1 Tetraodon nigroviridis ENSTNIG00000018678 I
osr1 Takifugu rubripes ENSTRUG00000005046 I
OSR1 Tursiops truncatus ENSTTRG00000009823 I
osr1 Xenopus tropicalis XB-GENE-481410 I
osr2 Danio rerio ENSDARG00000038006 I
OSR2 Homo sapiens ENSG00000164920 D
osr2 Gasterosteus aculeatus ENSGACG00000003524 I
Osr2 Mus musculus ENSMUSG00000022330 D
Osr2 Rattus norvegicus ENSRNOG00000011136 I
OSR2 Sus scrofa ENSSSCG00000006073 I
osr2 Tetraodon nigroviridis ENSTNIG00000013301 I
osr2 Takifugu rubripes ENSTRUG00000011070 I
osr2.L Xenopus laevis XB-GENE-864802 I
osr2.S Xenopus laevis XB-GENE-6254720 I
Pvit_07082 Pogona vitticeps Pvit_07082 I
Tal_R009607 Tyto alba Tal_R009607 I