gene15563-v1.0-hybrid (Fragaria vesca)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 gene15563-v1.0-hybrid T258334_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna15563.1-v1.0-hybrid MADS box 9 44

Links

Other MADS box family TFs
Other Fragaria vesca TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA013533 Oryza indica BGIOSGA013533 N
BHLH148 Oryza sativa OS03G0741100 N
BRADI1G09177 Brachypodium distachyon BRADI1G09177 N
GSMUA_Achr3G29320_001 Musa acuminata GSMUA_Achr3G29320_001 N
GSMUA_Achr4G11160_001 Musa acuminata GSMUA_Achr4G11160_001 N
LPERR03G28140 Leersia perrieri LPERR03G28140 N
MLOC_74977 Hordeum vulgare MLOC_74977 N
OB03G40700 Oryza brachyantha OB03G40700 N
OBART03G33610 Oryza barthii OBART03G33610 N
OGLUM03G33270 Oryza glumaepatula OGLUM03G33270 N
OLONG_003946 Oryza longistaminata OLONG_003946 N
ONIVA10G02990 Oryza nivara ONIVA10G02990 N
OPUNC03G30800 Oryza punctata OPUNC03G30800 N
ORGLA03G0304100 Oryza glaberrima ORGLA03G0304100 N
ORUFI03G34980 Oryza rufipogon ORUFI03G34980 N
Pavir.Ia00623 Panicum virgatum Pavir.Ia00623 N
Pavir.J38335 Panicum virgatum Pavir.J38335 N
PDK_20s1685261g001 Phoenix dactylifera PDK_20s1685261g001 N
Sb01g008570 Sorghum bicolor Sb01g008570 N
Si036716m.g Setaria italica Si036716m.g N
Traes_5BL_39FD9626E Triticum aestivum Traes_5BL_39FD9626E N
Traes_5DL_2A286B481 Triticum aestivum Traes_5DL_2A286B481 N