Gorai.011G158700 (Gossypium raimondii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Gorai.011G158700 T258478_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.011G158700.1 MADS box 31 78

Links

Other MADS box family TFs
Other Gossypium raimondii TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30148.m001468 Ricinus communis 30148.m001468 N
AMTR_s00011p00266100 Amborella trichopoda AMTR_s00011p00266100 N
Aquca_052_00048 Aquilegia coerulea Aquca_052_00048 N
BGIOSGA028041 Oryza indica BGIOSGA028041 N
Bo2g097550 Brassica oleracea Bo2g097550 N
Bostr.10180s0008 Boechera stricta Bostr.10180s0008 N
Bra008513 Brassica rapa Bra008513 N
BRADI3G16040 Brachypodium distachyon BRADI3G16040 N
Cagra.2194s0001 Capsella grandiflora Cagra.2194s0001 N
Carubv10020145m.g Capsella rubella Carubv10020145m.g N
cassava13701.valid.m1 Manihot esculenta cassava13701.valid.m1 N
cassava13702.valid.m1 Manihot esculenta cassava13702.valid.m1 N
cassava41980.valid.m1 Manihot esculenta cassava41980.valid.m1 N
Ca_22622 Cicer arietinum Ca_22622 N
Ca_22625 Cicer arietinum Ca_22625 N
chr3.CM0127.660.nc Lotus japonicus chr3.CM0127.660.nc N
Ciclev10031289m.g Citrus clementina Ciclev10031289m.g N
Cla006897 Citrullus lanatus Cla006897 N
Cucsa.073340 Cucumis sativus Cucsa.073340 N
Eucgr.A02994 Eucalyptus grandis Eucgr.A02994 N
evm.TU.supercontig_3807.1 Carica papaya evm.TU.supercontig_3807.1 N
F775_32229 Aegilops tauschii F775_32229 N
gene12547-v1.0-hybrid Fragaria vesca gene12547-v1.0-hybrid N
GLYMA09G35750 Glycine max GLYMA09G35750 N
GLYMA12G01600 Glycine max GLYMA12G01600 N
Gorai.004G255000 Gossypium raimondii Gorai.004G255000 N
Gorai.007G247500 Gossypium raimondii Gorai.007G247500 N
GRMZM2G006736 Zea mays GRMZM2G006736 N
GRMZM2G543629 Zea mays GRMZM2G543629 N
GSMUA_Achr11G08010_001 Musa acuminata GSMUA_Achr11G08010_001 N
GSMUA_Achr1G10700_001 Musa acuminata GSMUA_Achr1G10700_001 N
LPERR08G03850 Leersia perrieri LPERR08G03850 N
Lus10020365.g Linum usitatissimum Lus10020365.g N
MDP0000934360 Malus domestica MDP0000934360 N
MDP0000939377 Malus domestica MDP0000939377 N
mgf004750m Mimulus guttatus mgf004750m N
mgf015154m Mimulus guttatus mgf015154m N
mgf016433m Mimulus guttatus mgf016433m N
MTR_0172s0030 Medicago truncatula MTR_0172s0030 N
OB08G14150 Oryza brachyantha OB08G14150 N
OBART08G03910 Oryza barthii OBART08G03910 N
OGLUM08G04010 Oryza glumaepatula OGLUM08G04010 N
OLONG_000145 Oryza longistaminata OLONG_000145 N
OMERI08G04040 Oryza meridionalis OMERI08G04040 N
ONIVA08G03880 Oryza nivara ONIVA08G03880 N
OPUNC08G03810 Oryza punctata OPUNC08G03810 N
orange1.1g010521m.g Citrus sinensis orange1.1g010521m.g N
ORGLA08G0033200 Oryza glaberrima ORGLA08G0033200 N
ORUFI08G04310 Oryza rufipogon ORUFI08G04310 N
OS08G0163400 Oryza sativa OS08G0163400 N
Pavir.Fb00544 Panicum virgatum Pavir.Fb00544 N
Pavir.J39657 Panicum virgatum Pavir.J39657 N
PDK_20s1319221g002 Phoenix dactylifera PDK_20s1319221g002 N
PGSC0003DMG400026491 Solanum tuberosum PGSC0003DMG400026491 N
PGSC0003DMG400027038 Solanum tuberosum PGSC0003DMG400027038 N
PK03826.1 Cannabis sativa PK03826.1 N
Pm019567 Prunus mume Pm019567 N
POPTR_0019s06020 Populus trichocarpa POPTR_0019s06020 N
PRUPE_ppa004393mg Prunus persica PRUPE_ppa004393mg N
SapurV1A.0592s0030 Salix purpurea SapurV1A.0592s0030 N
SapurV1A.1326s0010 Salix purpurea SapurV1A.1326s0010 N
SapurV1A.1456s0040 Salix purpurea SapurV1A.1456s0040 N
Sb07g004340 Sorghum bicolor Sb07g004340 N
Si013608m.g Setaria italica Si013608m.g N
SIGA Arabidopsis thaliana AT1G64860 N
SIGA Vitis vinifera VIT_16s0039g00660 N
SIGA Arabidopsis lyrata scaffold_200883.1 N
Solyc03g097320.2 Solanum lycopersicum Solyc03g097320.2 N
Solyc06g072710.2 Solanum lycopersicum Solyc06g072710.2 N
TCM_025640 Theobroma cacao TCM_025640 N
Thhalv10002486m.g Eutrema salsugineum Thhalv10002486m.g N
Traes_7AL_33A778289 Triticum aestivum Traes_7AL_33A778289 N
Traes_7BL_0D553E505 Triticum aestivum Traes_7BL_0D553E505 N
Traes_7DL_21A260D0C Triticum aestivum Traes_7DL_21A260D0C N
TRIUR3_34525 Triticum urartu TRIUR3_34525 N