Lus10011787.g (Linum usitatissimum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Lus10011787.g T258550_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10011787 MADS box 10 57

Links

Other MADS box family TFs
Other Linum usitatissimum TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29693.m002039 Ricinus communis 29693.m002039 I 0.833
AGL29 Arabidopsis lyrata fgenesh2_kg.4__1464__AT2G34440.1 I 0.708
AGL29 Arabidopsis thaliana AT2G34440 I 0.708
Bostr.23794s0666 Boechera stricta Bostr.23794s0666 I 0.708
Cagra.7352s0007 Capsella grandiflora Cagra.7352s0007 I 0.708
Carubv10025656m.g Capsella rubella Carubv10025656m.g I 0.708
cassava10519.m1 Manihot esculenta cassava10519.m1 I 0.792
Ciclev10017472m.g Citrus clementina Ciclev10017472m.g I 0.771
Cla019897 Citrullus lanatus Cla019897 N 0.708
Cucsa.212320 Cucumis sativus Cucsa.212320 N 0.708
Eucgr.D00311 Eucalyptus grandis Eucgr.D00311 N 0.812
Eucgr.D00312 Eucalyptus grandis Eucgr.D00312 N 0.771
Eucgr.D00313 Eucalyptus grandis Eucgr.D00313 N 0.792
gene30567-v1.0-hybrid Fragaria vesca gene30567-v1.0-hybrid I 0.729
Gorai.010G165500 Gossypium raimondii Gorai.010G165500 I 0.750
Lus10016563.g Linum usitatissimum Lus10016563.g N 0.750
Lus10040832.g Linum usitatissimum Lus10040832.g N 0.854
MDP0000274606 Malus domestica MDP0000274606 N 0.750
orange1.1g037442m.g Citrus sinensis orange1.1g037442m.g I 0.771
Pm030655 Prunus mume Pm030655 I 0.750
POPTR_0004s13600 Populus trichocarpa POPTR_0004s13600 N 0.771
PRUPE_ppa024816mg Prunus persica PRUPE_ppa024816mg I 0.750
SapurV1A.0560s0040 Salix purpurea SapurV1A.0560s0040 N 0.792
SapurV1A.2238s0010 Salix purpurea SapurV1A.2238s0010 N 0.792
TCM_006325 Theobroma cacao TCM_006325 N 0.708
TCM_029518 Theobroma cacao TCM_029518 I 0.792