CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
EFA79888.1
(
Polysphondylium pallidum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
EFA79888.1
T259216_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFA79888.1
MADS box
10
61
KITDERNRQVTFTKRKNGLIKKAMELAVLCDSSVTLVIVNNSPNAKEKYFQY
Links
Other
MADS box
family TFs
Other
Polysphondylium pallidum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgeneshDP_pm.C_5760001
Dictyostelium purpureum
estExt_fgeneshDP_pm.C_5760001
N
0.875
EuGene.1600010231
Micromonas sp RCC299
EuGene.1600010231
I
0.708
e_gw1.01.00.699.1
Ostreococcus tauri
e_gw1.01.00.699.1
I
0.708
e_gw1.13.374.1
Micromonas pusilla
e_gw1.13.374.1
I
0.729
e_gw1.9.373.1
Coccomyxa subellipsoidea C169
e_gw1.9.373.1
I
0.729
gw1.1.1011.1
Ostreococcus RCC809
gw1.1.1011.1
I
0.708
MEF2A
Homo sapiens
ENSG00000068305
D
0.793
Mef2c
Mus musculus
ENSMUSG00000005583
D
0.800
OSTLU_29140
Ostreococcus lucimarinus
OSTLU_29140
I
0.729
srfD
Dictyostelium discoideum
DDB_G0283483
N
0.875