CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Setdb2
(
Rattus norvegicus
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
ENSRNOG00000021680
T260409_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000036240
MBD
148
220
KGENPLQLPLRCHFQRRHAKTNSPSAALHVNYRTPCGRSLRNMEEVFHYLLETECNFLFTDNFSFNTYVQLTR
ENSRNOP00000065027
MBD
126
198
KGENPLQLPLRCHFQRRHAKTNSPSAALHVNYRTPCGRSLRNMEEVFHYLLETECNFLFTDNFSFNTYVQLTR
ENSRNOP00000066366
MBD
165
237
KGENPLQLPLRCHFQRRHAKTNSPSAALHVNYRTPCGRSLRNMEEVFHYLLETECNFLFTDNFSFNTYVQLTR
Links
Other
MBD
family TFs
Other
Rattus norvegicus
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_030_00038
Aquilegia coerulea
Aquca_030_00038
I
AtMYB27
Vitis vinifera
VIT_08s0007g04830
I
Bostr.9544s0002
Boechera stricta
Bostr.9544s0002
I
Cagra.0612s0043
Capsella grandiflora
Cagra.0612s0043
I
Carubv10019409m.g
Capsella rubella
Carubv10019409m.g
I
evm.TU.supercontig_92.99
Carica papaya
evm.TU.supercontig_92.99
I
gene09683-v1.0-hybrid
Fragaria vesca
gene09683-v1.0-hybrid
I
Gorai.009G413600
Gossypium raimondii
Gorai.009G413600
I
GRMZM2G048136
Zea mays
GRMZM2G048136
I
PK10274.1
Cannabis sativa
PK10274.1
I
Pm026334
Prunus mume
Pm026334
N
TCM_022293
Theobroma cacao
TCM_022293
I