CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_005_00236
(
Aquilegia coerulea
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Aquca_005_00236
T264541_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_005_00236.1
mTERF
206
300
RYPQLSEELELDEKWFPLLDYLSTFGLKESHFIQIYERRMASLQINVASAQERLEFLLSVGVKHKDIRKIIMRQPQILEYTVENNLKSHVGFLVD
Aquca_005_00236.1
mTERF
285
500
YTVENNLKSHVGFLVDLGVPHSRIGHIISAAPSLFSYSVEQSLKPTVRYLVEEVGIKTSDVSKVVQLSPQILVQRLDNSWSTRYGFLSKELGASKDSIVKMVRKHPQLLHYSIEDGILPRINFLRSIGMCNSEVLKVLTSLTQVLSLSLEDNLKPKYLYLVNDLKNEVQSLTKYPTYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTDECF
Aquca_005_00236.2
mTERF
91
185
RYPQLSEELELDEKWFPLLDYLSTFGLKESHFIQIYERRMASLQINVASAQERLEFLLSVGVKHKDIRKIIMRQPQILEYTVENNLKSHVGFLVD
Aquca_005_00236.2
mTERF
170
385
YTVENNLKSHVGFLVDLGVPHSRIGHIISAAPSLFSYSVEQSLKPTVRYLVEEVGIKTSDVSKVVQLSPQILVQRLDNSWSTRYGFLSKELGASKDSIVKMVRKHPQLLHYSIEDGILPRINFLRSIGMCNSEVLKVLTSLTQVLSLSLEDNLKPKYLYLVNDLKNEVQSLTKYPTYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTDECF
Links
Other
mTERF
family TFs
Other
Aquilegia coerulea
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00088p00159600
Amborella trichopoda
AMTR_s00088p00159600
N
0.787
BGIOSGA026020
Oryza indica
BGIOSGA026020
N
0.777
BRADI1G23400
Brachypodium distachyon
BRADI1G23400
N
0.760
Ciclev10008511m.g
Citrus clementina
Ciclev10008511m.g
N
0.743
Cla003344
Citrullus lanatus
Cla003344
N
0.820
Cucsa.304690
Cucumis sativus
Cucsa.304690
N
0.803
F775_02643
Aegilops tauschii
F775_02643
N
0.747
gene03554-v1.0-hybrid
Fragaria vesca
gene03554-v1.0-hybrid
N
0.799
GRMZM2G130773
Zea mays
GRMZM2G130773
N
0.783
GSMUA_Achr3G29890_001
Musa acuminata
GSMUA_Achr3G29890_001
N
0.833
LPERR07G17420
Leersia perrieri
LPERR07G17420
N
0.793
Lus10003775.g
Linum usitatissimum
Lus10003775.g
N
0.747
MLOC_4927
Hordeum vulgare
MLOC_4927
N
0.763
OB07G25840
Oryza brachyantha
OB07G25840
N
0.773
OBART07G20100
Oryza barthii
OBART07G20100
N
0.783
OGLUM07G19880
Oryza glumaepatula
OGLUM07G19880
N
0.780
OMERI07G16780
Oryza meridionalis
OMERI07G16780
N
0.773
OPUNC07G18990
Oryza punctata
OPUNC07G18990
N
0.780
orange1.1g010604m.g
Citrus sinensis
orange1.1g010604m.g
N
0.743
OS07G0583200
Oryza sativa
OS07G0583200
N
0.780
Pavir.Bb03222
Panicum virgatum
Pavir.Bb03222
N
0.767
Pavir.J07102
Panicum virgatum
Pavir.J07102
N
0.777
PDK_20s1307431g001
Phoenix dactylifera
PDK_20s1307431g001
N
0.793
Pm029551
Prunus mume
Pm029551
N
0.807
PRUPE_ppa006059m1g
Prunus persica
PRUPE_ppa006059m1g
N
0.803
PRUPE_ppa015320mg
Prunus persica
PRUPE_ppa015320mg
N
0.767
Sb02g037620
Sorghum bicolor
Sb02g037620
N
0.780
Si029526m.g
Setaria italica
Si029526m.g
N
0.783
Solyc12g015640.1
Solanum lycopersicum
Solyc12g015640.1
N
0.770
Traes_2AS_2C198FE96
Triticum aestivum
Traes_2AS_2C198FE96
N
0.747
Traes_2BS_999491428
Triticum aestivum
Traes_2BS_999491428
N
0.757
Traes_2DS_BCB7C3C11
Triticum aestivum
Traes_2DS_BCB7C3C11
N
0.747
TRIUR3_21656
Triticum urartu
TRIUR3_21656
N
0.753
VIT_19s0090g01770
Vitis vinifera
VIT_19s0090g01770
N
0.763