CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0448s0035
(
Capsella grandiflora
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Cagra.0448s0035
T264612_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0448s0035.1.p
mTERF
89
432
LKLLRSNGFKDSQVSMIIRTYPQLLVTDAEKSLLPKLQILQSRGASRSEVTEIVSIVPAILGKKGEKSISLYYDLVKDIMQDGKSSKCEKLCHSWPEGKSKNKIRNISLLRELGVPHKLLFSLLISNSQPVYGKERFEETLKKVVDMGFDPAKSKFVEALRVVYEMSDKTIEEKVNVYKGLGFSEAEVWAIFKKWPFFLKFSEKKITQMFETLKKCGLLEKEVLSVLKTRPQCIRASEQKILDSIQTFLDLGFSRDEFRMMVKRYPHCTGYSAELVKKKFDFLVKKMNWPLEAVVLIPAVLGYSLEKRIMPRCNVIKALMSKRLIGSENPPISSVLVCTDQEFL
Links
Other
mTERF
family TFs
Other
Capsella grandiflora
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT1G61960
Arabidopsis thaliana
AT1G61960
N
0.700
AT1G62085
Arabidopsis thaliana
AT1G62085
N
0.716
AT3G46950
Arabidopsis thaliana
AT3G46950
N
0.790
Bo3g134070
Brassica oleracea
Bo3g134070
N
0.719
Bostr.18473s0264
Boechera stricta
Bostr.18473s0264
N
0.897
Bostr.22157s0170
Boechera stricta
Bostr.22157s0170
N
0.719
Bra018182
Brassica rapa
Bra018182
N
0.729
Carubv10018684m.g
Capsella rubella
Carubv10018684m.g
N
0.994
fgenesh2_kg.5__1064__AT3G46950.1
Arabidopsis lyrata
fgenesh2_kg.5__1064__AT3G46950.1
N
0.761