AMTR_s00025p00072580 (Amborella trichopoda)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AMTR_s00025p00072580 T266175_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASR3
M07053_2.00 		Arabidopsis thaliana
DNNNNHHWNDRCCCTWAW
WTWAGGGYHNWDDNNNNH		 Dap-seq
OMalley et al.(2016)
AT2G33550_col_a 		0.740 0.822
ASR3
M07054_2.00 		Arabidopsis thaliana
NHWDDTRCCCTWMW
WKWAGGGYAHHWDN		 Dap-seq
OMalley et al.(2016)
AT2G33550_colamp_a 		0.740 0.822
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN12336 Myb 34 98

Links

Other Myb/SANT family TFs
Other Amborella trichopoda TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000005064 Ailuropoda melanoleuca ENSAMEG00000005064 N
ENSECAG00000016694 Equus caballus ENSECAG00000016694 N
ENSMICG00000013028 Microcebus murinus ENSMICG00000013028 N
ENSNLEG00000008931 Nomascus leucogenys ENSNLEG00000008931 N
ENSOARG00000001821 Ovis aries ENSOARG00000001821 N
ENSOGAG00000002510 Otolemur garnettii ENSOGAG00000002510 N
ENSP00000305533 Macaca fascicularis ENSP00000305533 N
ENSP00000305533-D1 Bos grunniens ENSP00000305533-D1 N
ENSPANG00000014746 Papio anubis ENSPANG00000014746 N
ENSPPYG00000014891 Pongo abelii ENSPPYG00000014891 N
ENSSTOG00000012475 Ictidomys tridecemlineatus ENSSTOG00000012475 N
ENSTSYG00000005287 Tarsius syrichta ENSTSYG00000005287 N
Ogr14301 Ophisaurus gracilis Ogr14301 N
THAP9 Pan troglodytes ENSPTRG00000016222 N
THAP9 Pteropus vampyrus ENSPVAG00000016817 N
THAP9 Sorex araneus ENSSARG00000003861 N
THAP9 Sus scrofa ENSSSCG00000009243 N
THAP9 Tursiops truncatus ENSTTRG00000007672 N
THAP9 Vicugna pacos ENSVPAG00000011351 N
THAP9 Oryctolagus cuniculus ENSOCUG00000000333 N
THAP9 Ochotona princeps ENSOPRG00000012584 N
THAP9 Macaca mulatta ENSMMUG00000008510 N
THAP9 Myotis lucifugus ENSMLUG00000002988 N
THAP9 Loxodonta africana ENSLAFG00000016726 N
THAP9 Gorilla gorilla ENSGGOG00000011634 N
THAP9 Homo sapiens ENSG00000168152 N
THAP9 Felis catus ENSFCAG00000022064 N
THAP9 Dasypus novemcinctus ENSDNOG00000043565 N
THAP9 Callithrix jacchus ENSCJAG00000005095 N
THAP9 Choloepus hoffmanni ENSCHOG00000004005 N
THAP9 Canis familiaris ENSCAFG00000009050 N
THAP9 Bos taurus ENSBTAG00000022450 N