CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Bo8g058860 *(Brassica oleracea)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	Bo8g058860	T267547_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
CDC5 M02698_2.00	Arabidopsis thaliana	NVCGCTGAGBN	NVCTCAGCGBN	SELEX Mathelier et al.(2014) MA0579.1	0.909	1.000
CDC5 M11037_2.00	Arabidopsis thaliana	NVCGCTGAGBN	NVCTCAGCGBN	Transfac Matys et al.(2006) P$CDC5_01	0.909	1.000
CDC5L M11049_2.00	Homo sapiens	GWKTTAAYRTAD	HTAYRTTAAMWC	Transfac Matys et al.(2006) V$CDC5_01	0.814	0.870
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Bo8g058860.1	Myb	7	53	GGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWL
Bo8g058860.1	Myb	59	103	KTEWTREEDEKLLHLAKLLPTQWRTIAPIVGRTPSQCLERYEKLL

Links
Other Myb/SANT family TFs
Other *Brassica oleracea* TFs