Bra005486 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra005486 T267756_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASR3
M07053_2.00 		Arabidopsis thaliana
DNNNNHHWNDRCCCTWAW
WTWAGGGYHNWDDNNNNH		 Dap-seq
OMalley et al.(2016)
AT2G33550_col_a 		0.870 0.978
ASR3
M07054_2.00 		Arabidopsis thaliana
NHWDDTRCCCTWMW
WKWAGGGYAHHWDN		 Dap-seq
OMalley et al.(2016)
AT2G33550_colamp_a 		0.870 0.978
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra005486.1-P Myb 48 115

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG012491.1 Alligator sinensis Alligator_sinensis_CCG012491.1 N
Cmyd_10013609 Chelonia mydas Cmyd_10013609 N
ENSAMEG00000013487 Ailuropoda melanoleuca ENSAMEG00000013487 N
ENSAPLG00000010584 Anas platyrhynchos ENSAPLG00000010584 N
ENSBTAP00000025518-D1 Bos grunniens ENSBTAP00000025518-D1 N
ENSCSAG00000017122 Chlorocebus sabaeus ENSCSAG00000017122 N
ENSFALG00000011037 Ficedula albicollis ENSFALG00000011037 N
ENSGALG00000027434 Gallus gallus ENSGALG00000027434 N
ENSLACG00000017953 Latimeria chalumnae ENSLACG00000017953 N
ENSLOCG00000014332 Lepisosteus oculatus ENSLOCG00000014332 N
ENSMLUG00000002963 Myotis lucifugus ENSMLUG00000002963 N
ENSMPUG00000015742 Mustela putorius furo ENSMPUG00000015742 N
ENSNLEG00000011807 Nomascus leucogenys ENSNLEG00000011807 N
ENSOARG00000011959 Ovis aries ENSOARG00000011959 N
ENSP00000268154 Macaca fascicularis ENSP00000268154 N
ENSPANG00000021467 Papio anubis ENSPANG00000021467 N
ENSSHAG00000011785 Sarcophilus harrisii ENSSHAG00000011785 N
ENSSTOG00000029208 Ictidomys tridecemlineatus ENSSTOG00000029208 N
Myotis_brandtii_ZNF710_10004291 Myotis brandtii Myotis_brandtii_ZNF710_10004291 N
Ogr13398 Ophisaurus gracilis Ogr13398 N
Pvit_14028 Pogona vitticeps Pvit_14028 N
Zfp710 Rattus norvegicus ENSRNOG00000014278 N
Zfp710 Mus musculus ENSMUSG00000048897 N
ZNF710 Pteropus vampyrus ENSPVAG00000011824 N
znf710 Xenopus tropicalis XB-GENE-981399 N
ZNF710 Sorex araneus ENSSARG00000010704 N
ZNF710 Sus scrofa ENSSSCG00000021361 N
ZNF710 Tursiops truncatus ENSTTRG00000000797 N
ZNF710 Callithrix jacchus ENSCJAG00000009435 N
ZNF710 Canis familiaris ENSCAFG00000012039 N
ZNF710 Bos taurus ENSBTAG00000019174 N
ZNF710 Felis catus ENSFCAG00000005268 N
ZNF710 Pan troglodytes ENSPTRG00000007445 N
ZNF710 Procavia capensis ENSPCAG00000007305 N
ZNF710 Otolemur garnettii ENSOGAG00000016446 N
ZNF710 Oryctolagus cuniculus ENSOCUG00000015114 N
ZNF710 Anolis carolinensis ENSACAG00000009870 N
ZNF710 Monodelphis domestica ENSMODG00000019518 N
ZNF710 Macaca mulatta ENSMMUG00000014831 N
ZNF710 Cavia porcellus ENSCPOG00000003532 N
ZNF710 Microcebus murinus ENSMICG00000011530 N
ZNF710 Dasypus novemcinctus ENSDNOG00000048028 N
ZNF710 Loxodonta africana ENSLAFG00000010169 N
ZNF710 Equus caballus ENSECAG00000023093 N
ZNF710 Gorilla gorilla ENSGGOG00000004875 N
ZNF710 Echinops telfairi ENSETEG00000007773 N
ZNF710 Homo sapiens ENSG00000140548 N