Bra009134 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra009134 T267810_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G05790
M07119_2.00 		Arabidopsis thaliana
HWYMTTATCHWNWHH
DDWNWDGATAAKRWD		 Dap-seq
OMalley et al.(2016)
At5g05790_col_a 		0.842 0.957
AT3G11280
M01075_2.00 		Arabidopsis thaliana
NNTTATCNNN
NNNGATAANN		 PBM
Sullivan et al.(2014)
pTH7245 		0.755 0.904
AT3G11280
M07074_2.00 		Arabidopsis thaliana
DWDWDGATAAKRWW
WWYMTTATCHWHWH		 Dap-seq
OMalley et al.(2016)
At3g11280_col_a 		0.755 0.904
AT3G11280
M07075_2.00 		Arabidopsis thaliana
NNWNNDGATAAGRWHDNN
NNHDWYCTTATCHNNWNN		 Dap-seq
OMalley et al.(2016)
At3g11280_colamp_a 		0.755 0.904
AT5G58900
M07146_2.00 		Arabidopsis thaliana
HHWWYCTTATCYWHW
WDWRGATAAGRWWDD		 Dap-seq
OMalley et al.(2016)
At5g58900_col_a 		0.662 0.755
AT5G58900
M07147_2.00 		Arabidopsis thaliana
HWYMTTATCHWNWWH
DWWNWDGATAAKRWD		 Dap-seq
OMalley et al.(2016)
At5g58900_colamp_a 		0.662 0.755
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra009134.1-P Myb 128 175

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R004458 Calypte anna Aan_R004458 I 0.000
Afo_R011755 Aptenodytes forsteri Afo_R011755 I 0.000
Alligator_sinensis_CCG019865.1 Alligator sinensis Alligator_sinensis_CCG019865.1 I 0.000
Brh_R002160 Buceros rhinoceros Brh_R002160 I 0.000
Cmyd_10010595 Chelonia mydas Cmyd_10010595 I 0.000
Cmyd_10013831 Chelonia mydas Cmyd_10013831 I 0.000
ENSACAG00000012356 Anolis carolinensis ENSACAG00000012356 I 0.000
ENSAMEG00000006403 Ailuropoda melanoleuca ENSAMEG00000006403 I 0.000
ENSAMXG00000003461 Astyanax mexicanus ENSAMXG00000003461 I 0.000
ENSAMXG00000012874 Astyanax mexicanus ENSAMXG00000012874 I 0.000
ENSAMXG00000016240 Astyanax mexicanus ENSAMXG00000016240 I 0.000
ENSAPLG00000012971 Anas platyrhynchos ENSAPLG00000012971 I 0.000
ENSCSAG00000008037 Chlorocebus sabaeus ENSCSAG00000008037 I 0.000
ENSDORG00000016283 Dipodomys ordii ENSDORG00000016283 I 0.000
ENSFALG00000012601 Ficedula albicollis ENSFALG00000012601 I 0.000
ENSGALG00000006245 Gallus gallus ENSGALG00000006245 I 0.000
ENSGMOG00000000921 Gadus morhua ENSGMOG00000000921 I 0.000
ENSGMOG00000003751 Gadus morhua ENSGMOG00000003751 I 0.000
ENSLACG00000009512 Latimeria chalumnae ENSLACG00000009512 I 0.000
ENSLACG00000013240 Latimeria chalumnae ENSLACG00000013240 I 0.000
ENSLOCG00000011807 Lepisosteus oculatus ENSLOCG00000011807 I 0.000
ENSLOCG00000013716 Lepisosteus oculatus ENSLOCG00000013716 I 0.000
ENSMPUG00000017390 Mustela putorius furo ENSMPUG00000017390 I 0.000
ENSNLEG00000001047 Nomascus leucogenys ENSNLEG00000001047 I 0.000
ENSONIG00000003215 Oreochromis niloticus ENSONIG00000003215 I 0.000
ENSONIG00000009164 Oreochromis niloticus ENSONIG00000009164 I 0.000
ENSP00000296233 Macaca fascicularis ENSP00000296233 I 0.000
ENSPANG00000026096 Papio anubis ENSPANG00000026096 I 0.000
ENSPFOG00000002472 Poecilia formosa ENSPFOG00000002472 I 0.000
ENSPFOG00000003698 Poecilia formosa ENSPFOG00000003698 I 0.000
ENSPFOG00000012815 Poecilia formosa ENSPFOG00000012815 I 0.000
ENSPPYG00000013455 Pongo abelii ENSPPYG00000013455 I 0.000
ENSSHAG00000007635 Sarcophilus harrisii ENSSHAG00000007635 I 0.000
ENSXMAG00000001323 Xiphophorus maculatus ENSXMAG00000001323 I 0.000
ENSXMAG00000007908 Xiphophorus maculatus ENSXMAG00000007908 I 0.000
ENSXMAG00000013094 Xiphophorus maculatus ENSXMAG00000013094 I 0.000
Gfo_R014652 Geospiza fortis Gfo_R014652 I 0.000
gw.37.333.1 Branchiostoma floridae gw.37.333.1 I 0.000
gw.442.76.1 Branchiostoma floridae gw.442.76.1 I 0.000
KLF15 Tursiops truncatus ENSTTRG00000008498 I 0.000
klf15 Takifugu rubripes ENSTRUG00000014976 I 0.000
KLF15 Takifugu rubripes ENSTRUG00000006529 I 0.000
Klf15 Rattus norvegicus ENSRNOG00000017808 I 0.000
KLF15 Ochotona princeps ENSOPRG00000005237 I 0.000
klf15 Xenopus tropicalis XB-GENE-854149 I 0.000
KLF15 Pteropus vampyrus ENSPVAG00000004109 I 0.000
KLF15 Loxodonta africana ENSLAFG00000011970 I 0.000
KLF15 Cavia porcellus ENSCPOG00000005315 I 0.000
KLF15 Callithrix jacchus ENSCJAG00000006941 I 0.000
klf15 Danio rerio ENSDARG00000091127 I 0.000
KLF15 Dasypus novemcinctus ENSDNOG00000036157 I 0.000
KLF15 Equus caballus ENSECAG00000021092 I 0.000
KLF15 Homo sapiens ENSG00000163884 D 0.000
klf15 Gasterosteus aculeatus ENSGACG00000003717 I 0.000
KLF15 Gasterosteus aculeatus ENSGACG00000011317 I 0.000
KLF15 Canis familiaris ENSCAFG00000003807 I 0.000
KLF15 Gorilla gorilla ENSGGOG00000009916 I 0.000
KLF15 Meleagris gallopavo ENSMGAG00000007616 I 0.000
KLF15 Myotis lucifugus ENSMLUG00000010178 I 0.000
KLF15 Macaca mulatta ENSMMUG00000003721 I 0.000
Klf15 Mus musculus ENSMUSG00000030087 D 0.000
KLF15 Bos taurus ENSBTAG00000008313 I 0.000
KLF15 Ornithorhynchus anatinus ENSOANG00000014825 I 0.000
KLF15 Otolemur garnettii ENSOGAG00000000703 I 0.000
klf15 Oryzias latipes ENSORLG00000001165 I 0.000
KLF15 Procavia capensis ENSPCAG00000006301 I 0.000
klf15.2 Xenopus tropicalis XB-GENE-1018580 I 0.000
klf15.S Xenopus laevis XB-GENE-854150 I 0.000
Ogr01993 Ophisaurus gracilis Ogr01993 I 0.000
Ogr18174 Ophisaurus gracilis Ogr18174 I 0.000
Pvit_06090 Pogona vitticeps Pvit_06090 I 0.000
Pvit_11468 Pogona vitticeps Pvit_11468 I 0.000
Sakowv30044439m.g Saccoglossus kowalevskii Sakowv30044439m.g I 0.000
si:ch211-117k10.3 Danio rerio ENSDARG00000090914 I 0.000
si:ch211-117k10.3 Takifugu rubripes ENSTRUG00000000076 I 0.000
si:ch211-117k10.3 Tetraodon nigroviridis ENSTNIG00000007382 I 0.000
si:ch211-117k10.3 Oryzias latipes ENSORLG00000012237 I 0.000
SPU_015772 Strongylocentrotus purpuratus SPU_015772 I 0.000
Tal_R002960 Tyto alba Tal_R002960 I 0.000