Bra025311 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra025311 T267982_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WER
M11047_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2_01 		0.786 0.892
WER
M11048_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2 		0.786 0.892
MYB23
M07133_2.00 		Arabidopsis thaliana
HCAACWAHHHH
DDDDTWGTTGD		 Dap-seq
OMalley et al.(2016)
MYB23_col_a 		0.754 0.882
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra025311.1-P Myb 17 64
Bra025311.1-P Myb 70 115

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0002_1233 Arabidopsis lyrata Al_scaffold_0002_1233 I 0.000
AMTR_s00077p00103880 Amborella trichopoda AMTR_s00077p00103880 I 0.000
BGIOSGA017556 Oryza indica BGIOSGA017556 I 0.000
BGIOSGA017860 Oryza indica BGIOSGA017860 I 0.000
BGIOSGA030113 Oryza indica BGIOSGA030113 I 0.000
BGIOSGA030346 Oryza indica BGIOSGA030346 I 0.000
BGIOSGA034612 Oryza indica BGIOSGA034612 I 0.000
Bo01002s040 Brassica oleracea Bo01002s040 I 0.000
Bo2g024040 Brassica oleracea Bo2g024040 I 0.000
Bo2g095820 Brassica oleracea Bo2g095820 I 0.000
Bo5g068250 Brassica oleracea Bo5g068250 I 0.000
Bo6g066790 Brassica oleracea Bo6g066790 I 0.000
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I 0.000
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I 0.000
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I 0.000
Bostr.26959s0259 Boechera stricta Bostr.26959s0259 I 0.000
Bostr.26959s0261 Boechera stricta Bostr.26959s0261 I 0.000
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.000
Bostr.5022s0087 Boechera stricta Bostr.5022s0087 I 0.000
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I 0.000
Bra002421 Brassica rapa Bra002421 I 0.000
Bra008454 Brassica rapa Bra008454 I 0.000
Bra008456 Brassica rapa Bra008456 I 0.000
Bra008459 Brassica rapa Bra008459 I 0.000
Bra020196 Brassica rapa Bra020196 I 0.000
Bra020197 Brassica rapa Bra020197 I 0.000
Bra028918 Brassica rapa Bra028918 I 0.000
BRADI1G63220 Brachypodium distachyon BRADI1G63220 I 0.000
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I 0.000
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I 0.000
Cagra.20277s0001 Capsella grandiflora Cagra.20277s0001 I 0.000
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I 0.000
Carubv10002472m.g Capsella rubella Carubv10002472m.g I 0.000
Carubv10012720m.g Capsella rubella Carubv10012720m.g I 0.000
Carubv10021420m.g Capsella rubella Carubv10021420m.g I 0.000
Carubv10021860m.g Capsella rubella Carubv10021860m.g I 0.000
Carubv10021899m.g Capsella rubella Carubv10021899m.g I 0.000
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.000
Carubv10022162m.g Capsella rubella Carubv10022162m.g I 0.000
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.000
Eucgr.K01289 Eucalyptus grandis Eucgr.K01289 I 0.000
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.000
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.000
F775_02122 Aegilops tauschii F775_02122 I 0.000
F775_07376 Aegilops tauschii F775_07376 I 0.000
F775_23346 Aegilops tauschii F775_23346 N 0.000
gene13549-v1.0-hybrid Fragaria vesca gene13549-v1.0-hybrid I 0.000
gene13554-v1.0-hybrid Fragaria vesca gene13554-v1.0-hybrid I 0.000
GLYMA04G40121 Glycine max GLYMA04G40121 I 0.000
GLYMA13G34261 Glycine max GLYMA13G34261 I 0.000
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.000
LPERR05G06630 Leersia perrieri LPERR05G06630 I 0.000
LPERR05G16170 Leersia perrieri LPERR05G16170 I 0.000
Lus10025133.g Linum usitatissimum Lus10025133.g I 0.000
MDP0000146360 Malus domestica MDP0000146360 I 0.000
MDP0000299114 Malus domestica MDP0000299114 I 0.000
MDP0000315045 Malus domestica MDP0000315045 I 0.000
MDP0000578301 Malus domestica MDP0000578301 I 0.000
MLOC_68369 Hordeum vulgare MLOC_68369 N 0.000
MLOC_78461 Hordeum vulgare MLOC_78461 I 0.000
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.000
MTR_2g075700 Medicago truncatula MTR_2g075700 I 0.000
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.000
MTR_5g067680 Medicago truncatula MTR_5g067680 I 0.000
MTR_7g073430 Medicago truncatula MTR_7g073430 I 0.000
OB01G44150 Oryza brachyantha OB01G44150 I 0.000
OB05G17240 Oryza brachyantha OB05G17240 I 0.000
OB05G27830 Oryza brachyantha OB05G27830 I 0.000
OB05G27850 Oryza brachyantha OB05G27850 I 0.000
OBART05G08130 Oryza barthii OBART05G08130 I 0.000
OBART05G20330 Oryza barthii OBART05G20330 I 0.000
OBART05G20340 Oryza barthii OBART05G20340 I 0.000
OBART11G01110 Oryza barthii OBART11G01110 I 0.000
OGLUM05G08540 Oryza glumaepatula OGLUM05G08540 I 0.000
OGLUM05G21420 Oryza glumaepatula OGLUM05G21420 I 0.000
OGLUM05G21440 Oryza glumaepatula OGLUM05G21440 I 0.000
OGLUM05G21470 Oryza glumaepatula OGLUM05G21470 I 0.000
OGLUM05G21510 Oryza glumaepatula OGLUM05G21510 I 0.000
OGLUM11G00870 Oryza glumaepatula OGLUM11G00870 I 0.000
OLONG_002978 Oryza longistaminata OLONG_002978 I 0.000
OLONG_019907 Oryza longistaminata OLONG_019907 I 0.000
OLONG_027124 Oryza longistaminata OLONG_027124 I 0.000
OMERI05G18170 Oryza meridionalis OMERI05G18170 I 0.000
OMERI05G18250 Oryza meridionalis OMERI05G18250 I 0.000
OMERI05G18260 Oryza meridionalis OMERI05G18260 I 0.000
ONIVA05G08650 Oryza nivara ONIVA05G08650 I 0.000
ONIVA05G21440 Oryza nivara ONIVA05G21440 I 0.000
ONIVA05G21460 Oryza nivara ONIVA05G21460 I 0.000
ONIVA09G03360 Oryza nivara ONIVA09G03360 I 0.000
ONIVA11G01240 Oryza nivara ONIVA11G01240 I 0.000
OPUNC05G07410 Oryza punctata OPUNC05G07410 I 0.000
OPUNC05G17980 Oryza punctata OPUNC05G17980 I 0.000
OPUNC05G18000 Oryza punctata OPUNC05G18000 I 0.000
OPUNC05G18030 Oryza punctata OPUNC05G18030 I 0.000
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.000
ORGLA05G0070000 Oryza glaberrima ORGLA05G0070000 I 0.000
ORGLA05G0177200 Oryza glaberrima ORGLA05G0177200 I 0.000
ORGLA05G0177400 Oryza glaberrima ORGLA05G0177400 I 0.000
ORGLA09G0026100 Oryza glaberrima ORGLA09G0026100 I 0.000
ORGLA11G0202000 Oryza glaberrima ORGLA11G0202000 I 0.000
ORUFI05G08750 Oryza rufipogon ORUFI05G08750 I 0.000
ORUFI05G21560 Oryza rufipogon ORUFI05G21560 I 0.000
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I 0.000
OS05G0478400 Oryza sativa OS05G0478400 I 0.000
OS05G0478800 Oryza sativa OS05G0478800 I 0.000
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I 0.000
PGSC0003DMG400000211 Solanum tuberosum PGSC0003DMG400000211 I 0.000
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.000
Pm003014 Prunus mume Pm003014 I 0.000
Pm024064 Prunus mume Pm024064 I 0.000
PRUPE_ppa008573mg Prunus persica PRUPE_ppa008573mg I 0.000
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.000
SapurV1A.2126s0010 Salix purpurea SapurV1A.2126s0010 I 0.000
Si025181m.g Setaria italica Si025181m.g I 0.000
Si028202m.g Setaria italica Si028202m.g I 0.000
Solyc01g095630.2 Solanum lycopersicum Solyc01g095630.2 I 0.000
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.000
TCM_019689 Theobroma cacao TCM_019689 I 0.000
Thhalv10000686m.g Eutrema salsugineum Thhalv10000686m.g I 0.000
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.000
Thhalv10015295m.g Eutrema salsugineum Thhalv10015295m.g I 0.000
Thhalv10029232m.g Eutrema salsugineum Thhalv10029232m.g I 0.000
Traes_4AS_0DA136E0E Triticum aestivum Traes_4AS_0DA136E0E I 0.000
Traes_5BL_175E7FC38 Triticum aestivum Traes_5BL_175E7FC38 N 0.000
Traes_5DL_09F1F8F79 Triticum aestivum Traes_5DL_09F1F8F79 N 0.000
TRIUR3_24639 Triticum urartu TRIUR3_24639 N 0.000
VIT_08s0058g01390 Vitis vinifera VIT_08s0058g01390 I 0.000
WRKY38 Arabidopsis thaliana AT5G22570 D 0.000
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.000
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.000
WRKY62 Arabidopsis thaliana AT5G01900 D 0.000
WRKY63 Arabidopsis thaliana AT1G66600 D 0.000
WRKY64 Arabidopsis thaliana AT1G66560 I 0.000
WRKY66 Arabidopsis thaliana AT1G80590 I 0.000
WRKY67 Arabidopsis thaliana AT1G66550 I 0.000
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I 0.000