MTR_5g015340 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_5g015340 T274848_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK06103.1
M02348_2.00 		Cannabis sativa
TGCCCTAG
CTAGGGCA		 PBM
Weirauch et al.(2014)
pTH9649 		0.858 0.915
estExt_fgenesh1_pg.C_Chr_13.00010057
M02366_2.00 		Ostreococcus tauri
NRMCCTANN
NNTAGGKYN		 PBM
Weirauch et al.(2014)
pTH9424 		0.723 0.702
TRB2
M02314_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Weirauch et al.(2014)
pTH7094 		0.697 0.809
TRB2
M01083_2.00 		Arabidopsis thaliana
HRMCCTAR
YTAGGKYD		 PBM
Sullivan et al.(2014)
pTH7260 		0.697 0.809
TRB2
M07157_2.00 		Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN
NDDWTTAGGGYWWNDDDDD		 Dap-seq
OMalley et al.(2016)
TBP3_col_a 		0.697 0.809
TRB2
M07158_2.00 		Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH
DRDTTAGGGYTWNDDDHBD		 Dap-seq
OMalley et al.(2016)
TBP3_colamp_a 		0.697 0.809
TRB1
M01070_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Sullivan et al.(2014)
pTH7117 		0.681 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES94520 Myb 5 57
KEH27497 Myb 5 57
KEH27498 Myb 5 57

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

195 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB007753 Anopheles albimanus AALB007753 I
AARA011332 Anopheles arabiensis AARA011332 I
ACEP16391 Atta cephalotes ACEP16391 I
ACEP16397 Atta cephalotes ACEP16397 I
ACEP16409 Atta cephalotes ACEP16409 I
ACHR007816 Anopheles christyi ACHR007816 I
ACUA002933 Anopheles culicifacies ACUA002933 I
ACYPI007541 Acyrthosiphon pisum ACYPI007541 I
ADIR001029 Anopheles dirus ADIR001029 I
AEPI011470 Anopheles epiroticus AEPI011470 I
AFAF002111 Anopheles farauti AFAF002111 I
AFUN005474 Anopheles funestus AFUN005474 I
AFUN010424 Anopheles funestus AFUN010424 I
AMEC011614 Anopheles melas AMEC011614 I
AQUA008686 Anopheles quadriannulatus AQUA008686 I
ASIS002518 Anopheles sinensis ASIS002518 I
BGIBMGA008970 Bombyx mori BGIBMGA008970 I
CLEC011123 Cimex lectularius CLEC011123 I
CLEC011127 Cimex lectularius CLEC011127 I
CPIJ006369 Culex quinquefasciatus CPIJ006369 I
CPIJ006372 Culex quinquefasciatus CPIJ006372 I
CPIJ016826 Culex quinquefasciatus CPIJ016826 I
CpipJ_CPIJ006369 Culex pipiens CpipJ_CPIJ006369 I
CpipJ_CPIJ006372 Culex pipiens CpipJ_CPIJ006372 I
CpipJ_CPIJ016826 Culex pipiens CpipJ_CPIJ016826 I
ENSLACG00000013776 Latimeria chalumnae ENSLACG00000013776 I
ENSSHAG00000014782 Sarcophilus harrisii ENSSHAG00000014782 I
ENSSSCG00000025261 Sus scrofa ENSSSCG00000025261 I
ENSTRUG00000017865 Takifugu rubripes ENSTRUG00000017865 I
Gfo_R015914 Geospiza fortis Gfo_R015914 I
GI15484 Drosophila mojavensis FBgn0138233 I
HMEL009843 Heliconius melpomene HMEL009843 I
ISCW023333 Ixodes scapularis ISCW023333 I
KGM_02818 Danaus plexippus KGM_02818 I
LCUP002652 Lucilia cuprina LCUP002652 I
LCUP002657 Lucilia cuprina LCUP002657 I
LDEC003023 Leptinotarsa decemlineata LDEC003023 I
LDEC006650 Leptinotarsa decemlineata LDEC006650 I
LDEC020505 Leptinotarsa decemlineata LDEC020505 I
LLOJ002049 Lutzomyia longipalpis LLOJ002049 I
MESCA007079 Megaselia scalaris MESCA007079 I
PPAI010985 Phlebotomus papatasi PPAI010985 I
RPRC000026 Rhodnius prolixus RPRC000026 I
RUNX1 Pteropus vampyrus ENSPVAG00000001606 I
Runx1 Mus musculus ENSMUSG00000022952 D
RUNX1 Monodelphis domestica ENSMODG00000021051 I
RUNX1 Homo sapiens ENSG00000159216 D
runx1 Danio rerio ENSDARG00000087646 I
RUNX2 Pteropus vampyrus ENSPVAG00000001720 I
Runx2 Mus musculus ENSMUSG00000039153 D
RUNX2 Homo sapiens ENSG00000124813 D
SBAD_0000678401 Soboliphyme baturini SBAD_0000678401 N
SINV13345 Solenopsis invicta SINV13345 I
SMAR009403 Strigamia maritima SMAR009403 I
TC006536 Tribolium castaneum TC006536 I