OS01G0708000 (Oryza sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OS01G0708000 T277112_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS01G0708000
M02326_2.00		 Oryza sativa
WRMCCTAVNN
NNBTAGGKYW		 PBM
Weirauch et al.(2014)
pTH8716		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G72740
M07033_2.00 		Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD		 Dap-seq
OMalley et al.(2016)
AT1G72740_col_a 		0.804 0.766
AT1G72740
M07034_2.00 		Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND		 Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a 		0.804 0.766
TRB1
M01070_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Sullivan et al.(2014)
pTH7117 		0.761 0.787
TRB2
M02314_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Weirauch et al.(2014)
pTH7094 		0.665 0.766
TRB2
M01083_2.00 		Arabidopsis thaliana
HRMCCTAR
YTAGGKYD		 PBM
Sullivan et al.(2014)
pTH7260 		0.665 0.766
TRB2
M07157_2.00 		Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN
NDDWTTAGGGYWWNDDDDD		 Dap-seq
OMalley et al.(2016)
TBP3_col_a 		0.665 0.766
TRB2
M07158_2.00 		Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH
DRDTTAGGGYTWNDDDHBD		 Dap-seq
OMalley et al.(2016)
TBP3_colamp_a 		0.665 0.766
PK06103.1
M02348_2.00 		Cannabis sativa
TGCCCTAG
CTAGGGCA		 PBM
Weirauch et al.(2014)
pTH9649 		0.664 0.745
For this family, TFs with SR scores > 0.661 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02326_2.00 Myb 5 57

DNA Binding Domains

Protein ID Domain From To Sequence
OS01T0708000-00 Myb 5 57

Links

Other Myb/SANT family TFs
Other Oryza sativa TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASIM_0000067201 Anisakis simplex ASIM_0000067201 N
ASU_01158 Ascaris suum ASU_01158 N
Bm2735 Brugia malayi Bm2735 N
CBG02112 Caenorhabditis briggsae CBG02112 N
CBN13062 Caenorhabditis brenneri CBN13062 N
CJA03864 Caenorhabditis japonica CJA03864 N
CRE07382 Caenorhabditis remanei CRE07382 N
DME_0000232301 Dracunculus medinensis DME_0000232301 N
EEL_0000426601 Elaeophora elaphi EEL_0000426601 N
EVEC_0000118201 Enterobius vermicularis EVEC_0000118201 N
hlh-15 Caenorhabditis elegans WBGene00001959 N
HPLM_0001523301 Haemonchus placei HPLM_0001523301 N
L892_g21855 Steinernema scapterisci L892_g21855 N
L893_g21201 Steinernema glaseri L893_g21201 N
LOAG_02658 Loa loa LOAG_02658 N
nAv.1.0.1.g06563 Acanthocheilonema viteae nAv.1.0.1.g06563 N
nDi.2.2.2.g01604 Dirofilaria immitis nDi.2.2.2.g01604 N
OFLC_0001357601 Onchocerca flexuosa OFLC_0001357601 N
Ppa-hlh-15 Pristionchus pacificus PPA18782 N
PTRK_0001259000 Parastrongyloides trichosuri PTRK_0001259000 N
RSKR_0000319400 Rhabditophanes kr3021 RSKR_0000319400 N
scaffold4-EXSNAP2012.68 Pristionchus exspectatus scaffold4-EXSNAP2012.68 N
SPAL_0000999700 Strongyloides papillosus SPAL_0000999700 N
SSTP_0000772800 Strongyloides stercoralis SSTP_0000772800 N
TCNE_0000157901 Toxocara canis TCNE_0000157901 N
WUBG_01613 Wuchereria bancrofti WUBG_01613 N